Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HPS1Q92902 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HPS1Q92902 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HPS1Q92902 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.07■□□□□ 0.16
HPS1Q92902 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
HPS1Q92902 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HPS1Q92902 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HPS1Q92902 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.07■□□□□ 0.16
HPS1Q92902 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HPS1Q92902 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HPS1Q92902 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HPS1Q92902 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
HPS1Q92902 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HPS1Q92902 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
HPS1Q92902 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HPS1Q92902 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC16.07■□□□□ 0.16
HPS1Q92902 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.07■□□□□ 0.16
HPS1Q92902 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.07■□□□□ 0.16
HPS1Q92902 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.07■□□□□ 0.16
HPS1Q92902 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.07■□□□□ 0.16
HPS1Q92902 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.07■□□□□ 0.16
HPS1Q92902 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HPS1Q92902 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HPS1Q92902 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.07■□□□□ 0.16
HPS1Q92902 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HPS1Q92902 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HPS1Q92902 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HPS1Q92902 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HPS1Q92902 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HPS1Q92902 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HPS1Q92902 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HPS1Q92902 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
HPS1Q92902 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HPS1Q92902 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HPS1Q92902 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HPS1Q92902 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
HPS1Q92902 AC106886.4-201ENST00000623557 2502 ntBASIC16.06■□□□□ 0.16
HPS1Q92902 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.06■□□□□ 0.16
HPS1Q92902 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.06■□□□□ 0.16
HPS1Q92902 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HPS1Q92902 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
HPS1Q92902 REXO1L9P-201ENST00000604264 2108 ntBASIC16.06■□□□□ 0.16
HPS1Q92902 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HPS1Q92902 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HPS1Q92902 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HPS1Q92902 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HPS1Q92902 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HPS1Q92902 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HPS1Q92902 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HPS1Q92902 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.06■□□□□ 0.16
HPS1Q92902 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
HPS1Q92902 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.06■□□□□ 0.16
HPS1Q92902 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HPS1Q92902 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
HPS1Q92902 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.06■□□□□ 0.16
HPS1Q92902 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HPS1Q92902 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HPS1Q92902 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.06■□□□□ 0.16
HPS1Q92902 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.06■□□□□ 0.16
HPS1Q92902 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HPS1Q92902 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HPS1Q92902 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.06■□□□□ 0.16
HPS1Q92902 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.06■□□□□ 0.16
HPS1Q92902 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HPS1Q92902 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
HPS1Q92902 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HPS1Q92902 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HPS1Q92902 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
HPS1Q92902 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HPS1Q92902 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HPS1Q92902 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HPS1Q92902 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
HPS1Q92902 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
HPS1Q92902 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
HPS1Q92902 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
HPS1Q92902 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HPS1Q92902 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HPS1Q92902 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
HPS1Q92902 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
HPS1Q92902 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HPS1Q92902 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.05■□□□□ 0.16
HPS1Q92902 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HPS1Q92902 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HPS1Q92902 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.05■□□□□ 0.16
HPS1Q92902 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HPS1Q92902 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HPS1Q92902 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HPS1Q92902 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HPS1Q92902 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
HPS1Q92902 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
HPS1Q92902 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HPS1Q92902 AGGF1P2-201ENST00000426656 2106 ntBASIC16.05■□□□□ 0.16
HPS1Q92902 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.05■□□□□ 0.16
HPS1Q92902 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.05■□□□□ 0.16
HPS1Q92902 AC017007.3-201ENST00000479865 435 ntBASIC16.05■□□□□ 0.16
HPS1Q92902 AC063952.2-201ENST00000498792 1227 ntBASIC16.05■□□□□ 0.16
HPS1Q92902 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HPS1Q92902 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.05■□□□□ 0.16
HPS1Q92902 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.05■□□□□ 0.16
HPS1Q92902 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms