Protein–RNA interactions for Protein: Q8WW43

APH1B, Gamma-secretase subunit APH-1B, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1BQ8WW43 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.83■□□□□ 0.12
APH1BQ8WW43 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.83■□□□□ 0.12
APH1BQ8WW43 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
APH1BQ8WW43 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
APH1BQ8WW43 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
APH1BQ8WW43 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
APH1BQ8WW43 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
APH1BQ8WW43 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
APH1BQ8WW43 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
APH1BQ8WW43 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
APH1BQ8WW43 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
APH1BQ8WW43 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
APH1BQ8WW43 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
APH1BQ8WW43 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
APH1BQ8WW43 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
APH1BQ8WW43 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
APH1BQ8WW43 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.83■□□□□ 0.12
APH1BQ8WW43 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.83■□□□□ 0.12
APH1BQ8WW43 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.83■□□□□ 0.12
APH1BQ8WW43 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.83■□□□□ 0.12
APH1BQ8WW43 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
APH1BQ8WW43 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
APH1BQ8WW43 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APH1BQ8WW43 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
APH1BQ8WW43 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APH1BQ8WW43 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
APH1BQ8WW43 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APH1BQ8WW43 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.82■□□□□ 0.12
APH1BQ8WW43 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
APH1BQ8WW43 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APH1BQ8WW43 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
APH1BQ8WW43 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC15.82■□□□□ 0.12
APH1BQ8WW43 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
APH1BQ8WW43 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC15.82■□□□□ 0.12
APH1BQ8WW43 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APH1BQ8WW43 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC15.82■□□□□ 0.12
APH1BQ8WW43 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
APH1BQ8WW43 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
APH1BQ8WW43 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.82■□□□□ 0.12
APH1BQ8WW43 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
APH1BQ8WW43 DECR2-212ENST00000627716 352 ntTSL 2 BASIC15.82■□□□□ 0.12
APH1BQ8WW43 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
APH1BQ8WW43 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APH1BQ8WW43 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC15.82■□□□□ 0.12
APH1BQ8WW43 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
APH1BQ8WW43 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APH1BQ8WW43 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
APH1BQ8WW43 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
APH1BQ8WW43 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.82■□□□□ 0.12
APH1BQ8WW43 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
APH1BQ8WW43 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.82■□□□□ 0.12
APH1BQ8WW43 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
APH1BQ8WW43 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.82■□□□□ 0.12
APH1BQ8WW43 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
APH1BQ8WW43 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
APH1BQ8WW43 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.82■□□□□ 0.12
APH1BQ8WW43 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APH1BQ8WW43 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
APH1BQ8WW43 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
APH1BQ8WW43 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APH1BQ8WW43 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
APH1BQ8WW43 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
APH1BQ8WW43 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APH1BQ8WW43 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
APH1BQ8WW43 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APH1BQ8WW43 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APH1BQ8WW43 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APH1BQ8WW43 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APH1BQ8WW43 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.81■□□□□ 0.12
APH1BQ8WW43 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
APH1BQ8WW43 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.81■□□□□ 0.12
APH1BQ8WW43 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.81■□□□□ 0.12
APH1BQ8WW43 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APH1BQ8WW43 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.81■□□□□ 0.12
APH1BQ8WW43 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
APH1BQ8WW43 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.81■□□□□ 0.12
APH1BQ8WW43 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APH1BQ8WW43 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
APH1BQ8WW43 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
APH1BQ8WW43 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
APH1BQ8WW43 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
APH1BQ8WW43 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC15.81■□□□□ 0.12
APH1BQ8WW43 AC090192.1-201ENST00000517740 490 ntBASIC15.81■□□□□ 0.12
APH1BQ8WW43 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
APH1BQ8WW43 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.81■□□□□ 0.12
APH1BQ8WW43 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.81■□□□□ 0.12
APH1BQ8WW43 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.81■□□□□ 0.12
APH1BQ8WW43 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
APH1BQ8WW43 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
APH1BQ8WW43 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.81■□□□□ 0.12
APH1BQ8WW43 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
APH1BQ8WW43 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.81■□□□□ 0.12
APH1BQ8WW43 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APH1BQ8WW43 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
APH1BQ8WW43 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
APH1BQ8WW43 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.81■□□□□ 0.12
APH1BQ8WW43 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
APH1BQ8WW43 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APH1BQ8WW43 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.81■□□□□ 0.12
APH1BQ8WW43 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms