Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM11BQ8TCY0 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM11BQ8TCY0 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM11BQ8TCY0 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM11BQ8TCY0 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM11BQ8TCY0 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM11BQ8TCY0 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM11BQ8TCY0 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM11BQ8TCY0 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM11BQ8TCY0 AC009949.1-201ENST00000623048 1830 ntBASIC11.4□□□□□ -0.58
SMIM11BQ8TCY0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC11.4□□□□□ -0.58
SMIM11BQ8TCY0 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM11BQ8TCY0 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM11BQ8TCY0 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM11BQ8TCY0 TBC1D3P2-202ENST00000577902 1649 ntBASIC11.4□□□□□ -0.58
SMIM11BQ8TCY0 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM11BQ8TCY0 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM11BQ8TCY0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC11.4□□□□□ -0.58
SMIM11BQ8TCY0 AC097658.1-201ENST00000475555 843 ntBASIC11.4□□□□□ -0.58
SMIM11BQ8TCY0 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC11.4□□□□□ -0.58
SMIM11BQ8TCY0 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM11BQ8TCY0 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM11BQ8TCY0 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
SMIM11BQ8TCY0 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC11.4□□□□□ -0.58
SMIM11BQ8TCY0 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
SMIM11BQ8TCY0 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM11BQ8TCY0 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM11BQ8TCY0 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM11BQ8TCY0 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM11BQ8TCY0 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
SMIM11BQ8TCY0 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
SMIM11BQ8TCY0 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
SMIM11BQ8TCY0 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
SMIM11BQ8TCY0 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
SMIM11BQ8TCY0 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
SMIM11BQ8TCY0 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
SMIM11BQ8TCY0 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
SMIM11BQ8TCY0 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
SMIM11BQ8TCY0 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM11BQ8TCY0 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM11BQ8TCY0 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
SMIM11BQ8TCY0 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC11.39□□□□□ -0.59
SMIM11BQ8TCY0 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC11.39□□□□□ -0.59
SMIM11BQ8TCY0 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC11.39□□□□□ -0.59
SMIM11BQ8TCY0 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM11BQ8TCY0 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC11.39□□□□□ -0.59
SMIM11BQ8TCY0 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC11.39□□□□□ -0.59
SMIM11BQ8TCY0 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM11BQ8TCY0 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM11BQ8TCY0 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
SMIM11BQ8TCY0 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC11.39□□□□□ -0.59
SMIM11BQ8TCY0 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM11BQ8TCY0 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM11BQ8TCY0 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM11BQ8TCY0 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM11BQ8TCY0 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM11BQ8TCY0 MIR638-201ENST00000385237 100 ntBASIC11.39□□□□□ -0.59
SMIM11BQ8TCY0 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM11BQ8TCY0 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC11.39□□□□□ -0.59
SMIM11BQ8TCY0 UNC93B4-201ENST00000505679 747 ntBASIC11.39□□□□□ -0.59
SMIM11BQ8TCY0 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC11.39□□□□□ -0.59
SMIM11BQ8TCY0 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC11.39□□□□□ -0.59
SMIM11BQ8TCY0 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM11BQ8TCY0 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC11.39□□□□□ -0.59
SMIM11BQ8TCY0 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC11.39□□□□□ -0.59
SMIM11BQ8TCY0 AL050303.2-201ENST00000619798 666 ntBASIC11.39□□□□□ -0.59
SMIM11BQ8TCY0 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM11BQ8TCY0 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM11BQ8TCY0 AC078925.2-201ENST00000624013 1973 ntBASIC11.39□□□□□ -0.59
SMIM11BQ8TCY0 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM11BQ8TCY0 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM11BQ8TCY0 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC11.39□□□□□ -0.59
SMIM11BQ8TCY0 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 AC046185.3-201ENST00000623228 1824 ntBASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms