Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.4■□□□□ 0.54
SCUBE3Q8IX30 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCUBE3Q8IX30 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.4■□□□□ 0.54
SCUBE3Q8IX30 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.4■□□□□ 0.54
SCUBE3Q8IX30 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.4■□□□□ 0.54
SCUBE3Q8IX30 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SCUBE3Q8IX30 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCUBE3Q8IX30 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.4■□□□□ 0.54
SCUBE3Q8IX30 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SCUBE3Q8IX30 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCUBE3Q8IX30 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCUBE3Q8IX30 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCUBE3Q8IX30 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCUBE3Q8IX30 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCUBE3Q8IX30 AC141586.5-201ENST00000624546 2050 ntBASIC18.4■□□□□ 0.54
SCUBE3Q8IX30 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCUBE3Q8IX30 AC106820.2-201ENST00000563775 3264 ntBASIC18.4■□□□□ 0.54
SCUBE3Q8IX30 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.39■□□□□ 0.54
SCUBE3Q8IX30 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SCUBE3Q8IX30 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SCUBE3Q8IX30 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SCUBE3Q8IX30 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
SCUBE3Q8IX30 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCUBE3Q8IX30 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.39■□□□□ 0.53
SCUBE3Q8IX30 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCUBE3Q8IX30 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SCUBE3Q8IX30 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCUBE3Q8IX30 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.39■□□□□ 0.53
SCUBE3Q8IX30 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
SCUBE3Q8IX30 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCUBE3Q8IX30 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.39■□□□□ 0.53
SCUBE3Q8IX30 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.39■□□□□ 0.53
SCUBE3Q8IX30 FAAHP1-202ENST00000446499 1238 ntBASIC18.39■□□□□ 0.53
SCUBE3Q8IX30 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.39■□□□□ 0.53
SCUBE3Q8IX30 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.39■□□□□ 0.53
SCUBE3Q8IX30 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.39■□□□□ 0.53
SCUBE3Q8IX30 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.39■□□□□ 0.53
SCUBE3Q8IX30 AC004817.3-201ENST00000602957 2129 ntBASIC18.39■□□□□ 0.53
SCUBE3Q8IX30 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.39■□□□□ 0.53
SCUBE3Q8IX30 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.39■□□□□ 0.53
SCUBE3Q8IX30 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.39■□□□□ 0.53
SCUBE3Q8IX30 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.39■□□□□ 0.53
SCUBE3Q8IX30 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCUBE3Q8IX30 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCUBE3Q8IX30 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCUBE3Q8IX30 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCUBE3Q8IX30 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCUBE3Q8IX30 AC139713.2-201ENST00000641328 2723 ntBASIC18.38■□□□□ 0.53
SCUBE3Q8IX30 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCUBE3Q8IX30 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.38■□□□□ 0.53
SCUBE3Q8IX30 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCUBE3Q8IX30 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCUBE3Q8IX30 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCUBE3Q8IX30 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.38■□□□□ 0.53
SCUBE3Q8IX30 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCUBE3Q8IX30 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.38■□□□□ 0.53
SCUBE3Q8IX30 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SCUBE3Q8IX30 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SCUBE3Q8IX30 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCUBE3Q8IX30 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.38■□□□□ 0.53
SCUBE3Q8IX30 SAPCD2P3-201ENST00000455031 850 ntBASIC18.38■□□□□ 0.53
SCUBE3Q8IX30 STK19B-204ENST00000512515 211 ntBASIC18.38■□□□□ 0.53
SCUBE3Q8IX30 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.38■□□□□ 0.53
SCUBE3Q8IX30 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SCUBE3Q8IX30 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.38■□□□□ 0.53
SCUBE3Q8IX30 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.38■□□□□ 0.53
SCUBE3Q8IX30 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCUBE3Q8IX30 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCUBE3Q8IX30 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.38■□□□□ 0.53
SCUBE3Q8IX30 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCUBE3Q8IX30 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SCUBE3Q8IX30 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SCUBE3Q8IX30 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SCUBE3Q8IX30 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SCUBE3Q8IX30 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCUBE3Q8IX30 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.38■□□□□ 0.53
SCUBE3Q8IX30 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCUBE3Q8IX30 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCUBE3Q8IX30 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCUBE3Q8IX30 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.37■□□□□ 0.53
SCUBE3Q8IX30 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCUBE3Q8IX30 CROCCP2-202ENST00000412962 2773 ntBASIC18.37■□□□□ 0.53
SCUBE3Q8IX30 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCUBE3Q8IX30 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCUBE3Q8IX30 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCUBE3Q8IX30 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SCUBE3Q8IX30 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCUBE3Q8IX30 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCUBE3Q8IX30 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.37■□□□□ 0.53
SCUBE3Q8IX30 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCUBE3Q8IX30 KLF4P1-201ENST00000412782 1185 ntBASIC18.37■□□□□ 0.53
SCUBE3Q8IX30 RBM17P3-201ENST00000417687 1192 ntBASIC18.37■□□□□ 0.53
SCUBE3Q8IX30 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCUBE3Q8IX30 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCUBE3Q8IX30 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.37■□□□□ 0.53
SCUBE3Q8IX30 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.37■□□□□ 0.53
SCUBE3Q8IX30 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.37■□□□□ 0.53
SCUBE3Q8IX30 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCUBE3Q8IX30 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCUBE3Q8IX30 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms