Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
LYSMD2Q8IV50 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LYSMD2Q8IV50 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LYSMD2Q8IV50 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC15.39■□□□□ 0.05
LYSMD2Q8IV50 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LYSMD2Q8IV50 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC15.39■□□□□ 0.05
LYSMD2Q8IV50 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC15.39■□□□□ 0.05
LYSMD2Q8IV50 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.39■□□□□ 0.05
LYSMD2Q8IV50 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC15.39■□□□□ 0.05
LYSMD2Q8IV50 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
LYSMD2Q8IV50 CKBP1-201ENST00000565489 1086 ntBASIC15.39■□□□□ 0.05
LYSMD2Q8IV50 AL138781.1-201ENST00000566567 1274 ntBASIC15.39■□□□□ 0.05
LYSMD2Q8IV50 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC15.39■□□□□ 0.05
LYSMD2Q8IV50 AL137784.2-201ENST00000607332 1000 ntBASIC15.39■□□□□ 0.05
LYSMD2Q8IV50 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
LYSMD2Q8IV50 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
LYSMD2Q8IV50 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
LYSMD2Q8IV50 TCAF2P1-201ENST00000291129 2421 ntBASIC15.39■□□□□ 0.05
LYSMD2Q8IV50 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LYSMD2Q8IV50 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LYSMD2Q8IV50 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LYSMD2Q8IV50 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.39■□□□□ 0.05
LYSMD2Q8IV50 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LYSMD2Q8IV50 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
LYSMD2Q8IV50 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.39■□□□□ 0.05
LYSMD2Q8IV50 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
LYSMD2Q8IV50 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC15.39■□□□□ 0.05
LYSMD2Q8IV50 AC009102.3-201ENST00000623118 1491 ntBASIC15.39■□□□□ 0.05
LYSMD2Q8IV50 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
LYSMD2Q8IV50 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LYSMD2Q8IV50 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LYSMD2Q8IV50 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 MAP2K4P1-201ENST00000438453 1195 ntBASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 KRT16P5-201ENST00000455284 522 ntBASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 AC008403.3-201ENST00000598924 454 ntBASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 AC008622.2-201ENST00000617006 1229 ntBASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.38■□□□□ 0.05
LYSMD2Q8IV50 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms