Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 KRT89P-201ENST00000620027 1478 ntBASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 TSPY14P-201ENST00000303979 915 ntBASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 NEK4P2-201ENST00000580004 1012 ntBASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 AL157888.1-201ENST00000631930 593 ntBASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 FER1L4-210ENST00000615531 5998 ntBASIC11.98□□□□□ -0.49
LINC00242Q5T6M2 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 EGLN1P1-201ENST00000531623 762 ntBASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 AL512604.3-201ENST00000569583 964 ntBASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 AC024563.2-201ENST00000603282 481 ntBASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00242Q5T6M2 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms