Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SGO1Q5FBB7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SGO1Q5FBB7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SGO1Q5FBB7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SGO1Q5FBB7 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SGO1Q5FBB7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SGO1Q5FBB7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.05■□□□□ 0.32
SGO1Q5FBB7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SGO1Q5FBB7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SGO1Q5FBB7 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SGO1Q5FBB7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.05■□□□□ 0.32
SGO1Q5FBB7 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SGO1Q5FBB7 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SGO1Q5FBB7 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SGO1Q5FBB7 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SGO1Q5FBB7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.04■□□□□ 0.32
SGO1Q5FBB7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SGO1Q5FBB7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.04■□□□□ 0.32
SGO1Q5FBB7 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.04■□□□□ 0.32
SGO1Q5FBB7 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.04■□□□□ 0.32
SGO1Q5FBB7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SGO1Q5FBB7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.04■□□□□ 0.32
SGO1Q5FBB7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SGO1Q5FBB7 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SGO1Q5FBB7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.04■□□□□ 0.32
SGO1Q5FBB7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SGO1Q5FBB7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SGO1Q5FBB7 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.04■□□□□ 0.32
SGO1Q5FBB7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.04■□□□□ 0.32
SGO1Q5FBB7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.04■□□□□ 0.32
SGO1Q5FBB7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.04■□□□□ 0.32
SGO1Q5FBB7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SGO1Q5FBB7 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SGO1Q5FBB7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SGO1Q5FBB7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SGO1Q5FBB7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SGO1Q5FBB7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
SGO1Q5FBB7 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SGO1Q5FBB7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SGO1Q5FBB7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SGO1Q5FBB7 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SGO1Q5FBB7 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SGO1Q5FBB7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SGO1Q5FBB7 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SGO1Q5FBB7 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SGO1Q5FBB7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SGO1Q5FBB7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SGO1Q5FBB7 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SGO1Q5FBB7 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
SGO1Q5FBB7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SGO1Q5FBB7 AC022211.2-201ENST00000585075 2527 ntBASIC17.03■□□□□ 0.32
SGO1Q5FBB7 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
SGO1Q5FBB7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SGO1Q5FBB7 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SGO1Q5FBB7 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SGO1Q5FBB7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SGO1Q5FBB7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.03■□□□□ 0.32
SGO1Q5FBB7 AL645929.1-201ENST00000420084 975 ntBASIC17.03■□□□□ 0.32
SGO1Q5FBB7 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.03■□□□□ 0.32
SGO1Q5FBB7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SGO1Q5FBB7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.03■□□□□ 0.32
SGO1Q5FBB7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SGO1Q5FBB7 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
SGO1Q5FBB7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.03■□□□□ 0.32
SGO1Q5FBB7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.03■□□□□ 0.32
SGO1Q5FBB7 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SGO1Q5FBB7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SGO1Q5FBB7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SGO1Q5FBB7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SGO1Q5FBB7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SGO1Q5FBB7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
SGO1Q5FBB7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SGO1Q5FBB7 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SGO1Q5FBB7 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
SGO1Q5FBB7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.02■□□□□ 0.32
SGO1Q5FBB7 AC009053.2-201ENST00000563701 2365 ntBASIC17.02■□□□□ 0.32
SGO1Q5FBB7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.02■□□□□ 0.32
SGO1Q5FBB7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SGO1Q5FBB7 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.02■□□□□ 0.32
SGO1Q5FBB7 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SGO1Q5FBB7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SGO1Q5FBB7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SGO1Q5FBB7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SGO1Q5FBB7 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SGO1Q5FBB7 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.02■□□□□ 0.32
SGO1Q5FBB7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
SGO1Q5FBB7 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SGO1Q5FBB7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SGO1Q5FBB7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.02■□□□□ 0.32
SGO1Q5FBB7 TSPY22P-201ENST00000427496 604 ntBASIC17.02■□□□□ 0.32
SGO1Q5FBB7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.02■□□□□ 0.32
SGO1Q5FBB7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.02■□□□□ 0.32
SGO1Q5FBB7 LINC01238-205ENST00000567549 1107 ntBASIC17.02■□□□□ 0.32
SGO1Q5FBB7 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.02■□□□□ 0.32
SGO1Q5FBB7 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.02■□□□□ 0.32
SGO1Q5FBB7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SGO1Q5FBB7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.02■□□□□ 0.32
SGO1Q5FBB7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.02■□□□□ 0.32
SGO1Q5FBB7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
SGO1Q5FBB7 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms