Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.4■□□□□ 0.54
PTPN20Q4JDL3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.4■□□□□ 0.54
PTPN20Q4JDL3 AC132008.2-207ENST00000454517 770 ntBASIC18.4■□□□□ 0.54
PTPN20Q4JDL3 KRT18P56-201ENST00000507275 550 ntBASIC18.4■□□□□ 0.54
PTPN20Q4JDL3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.4■□□□□ 0.54
PTPN20Q4JDL3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PTPN20Q4JDL3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN20Q4JDL3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN20Q4JDL3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN20Q4JDL3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN20Q4JDL3 AC148477.5-201ENST00000625164 1645 ntBASIC18.4■□□□□ 0.54
PTPN20Q4JDL3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN20Q4JDL3 AC116353.5-201ENST00000638148 1699 ntBASIC18.4■□□□□ 0.54
PTPN20Q4JDL3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
PTPN20Q4JDL3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN20Q4JDL3 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.4■□□□□ 0.54
PTPN20Q4JDL3 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
PTPN20Q4JDL3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN20Q4JDL3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PTPN20Q4JDL3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN20Q4JDL3 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN20Q4JDL3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN20Q4JDL3 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN20Q4JDL3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.39■□□□□ 0.53
PTPN20Q4JDL3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.39■□□□□ 0.53
PTPN20Q4JDL3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN20Q4JDL3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN20Q4JDL3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.39■□□□□ 0.53
PTPN20Q4JDL3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PTPN20Q4JDL3 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.39■□□□□ 0.53
PTPN20Q4JDL3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.39■□□□□ 0.53
PTPN20Q4JDL3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN20Q4JDL3 AL121772.3-201ENST00000610840 674 ntBASIC18.39■□□□□ 0.53
PTPN20Q4JDL3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN20Q4JDL3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN20Q4JDL3 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN20Q4JDL3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN20Q4JDL3 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN20Q4JDL3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN20Q4JDL3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
PTPN20Q4JDL3 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN20Q4JDL3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN20Q4JDL3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN20Q4JDL3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN20Q4JDL3 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN20Q4JDL3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN20Q4JDL3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PTPN20Q4JDL3 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
PTPN20Q4JDL3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN20Q4JDL3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.38■□□□□ 0.53
PTPN20Q4JDL3 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN20Q4JDL3 AP001094.4-201ENST00000579008 2176 ntBASIC18.38■□□□□ 0.53
PTPN20Q4JDL3 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN20Q4JDL3 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN20Q4JDL3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PTPN20Q4JDL3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.38■□□□□ 0.53
PTPN20Q4JDL3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN20Q4JDL3 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN20Q4JDL3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN20Q4JDL3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN20Q4JDL3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.38■□□□□ 0.53
PTPN20Q4JDL3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.38■□□□□ 0.53
PTPN20Q4JDL3 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.38■□□□□ 0.53
PTPN20Q4JDL3 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.38■□□□□ 0.53
PTPN20Q4JDL3 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN20Q4JDL3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.38■□□□□ 0.53
PTPN20Q4JDL3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.38■□□□□ 0.53
PTPN20Q4JDL3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN20Q4JDL3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.38■□□□□ 0.53
PTPN20Q4JDL3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN20Q4JDL3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN20Q4JDL3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.38■□□□□ 0.53
PTPN20Q4JDL3 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN20Q4JDL3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN20Q4JDL3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN20Q4JDL3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN20Q4JDL3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN20Q4JDL3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN20Q4JDL3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PTPN20Q4JDL3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN20Q4JDL3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PTPN20Q4JDL3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN20Q4JDL3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN20Q4JDL3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PTPN20Q4JDL3 AC080080.1-201ENST00000625121 2420 ntBASIC18.37■□□□□ 0.53
PTPN20Q4JDL3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.37■□□□□ 0.53
PTPN20Q4JDL3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN20Q4JDL3 SPDYE21P-201ENST00000413323 827 ntBASIC18.37■□□□□ 0.53
PTPN20Q4JDL3 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.37■□□□□ 0.53
PTPN20Q4JDL3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.37■□□□□ 0.53
PTPN20Q4JDL3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN20Q4JDL3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.37■□□□□ 0.53
PTPN20Q4JDL3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.37■□□□□ 0.53
PTPN20Q4JDL3 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.37■□□□□ 0.53
PTPN20Q4JDL3 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.37■□□□□ 0.53
PTPN20Q4JDL3 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN20Q4JDL3 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN20Q4JDL3 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN20Q4JDL3 AP005117.1-201ENST00000584346 1413 ntBASIC18.37■□□□□ 0.53
PTPN20Q4JDL3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms