Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CFHR3Q02985 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CFHR3Q02985 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CFHR3Q02985 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CFHR3Q02985 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CFHR3Q02985 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CFHR3Q02985 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CFHR3Q02985 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CFHR3Q02985 AL355312.1-201ENST00000407115 2176 ntBASIC13.68□□□□□ -0.22
CFHR3Q02985 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CFHR3Q02985 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CFHR3Q02985 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CFHR3Q02985 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CFHR3Q02985 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CFHR3Q02985 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CFHR3Q02985 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CFHR3Q02985 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC13.67□□□□□ -0.22
CFHR3Q02985 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC13.67□□□□□ -0.22
CFHR3Q02985 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CFHR3Q02985 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC13.67□□□□□ -0.22
CFHR3Q02985 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CFHR3Q02985 MCC-208ENST00000514701 2855 ntTSL 2 BASIC13.67□□□□□ -0.22
CFHR3Q02985 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC13.67□□□□□ -0.22
CFHR3Q02985 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CFHR3Q02985 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CFHR3Q02985 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CFHR3Q02985 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CFHR3Q02985 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CFHR3Q02985 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CFHR3Q02985 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CFHR3Q02985 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CFHR3Q02985 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CFHR3Q02985 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CFHR3Q02985 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CFHR3Q02985 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CFHR3Q02985 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.67□□□□□ -0.22
CFHR3Q02985 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CFHR3Q02985 HNRNPDP1-201ENST00000439535 754 ntBASIC13.67□□□□□ -0.22
CFHR3Q02985 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.67□□□□□ -0.22
CFHR3Q02985 SIGLEC30P-201ENST00000455569 941 ntBASIC13.67□□□□□ -0.22
CFHR3Q02985 MTDHP4-201ENST00000600287 670 ntBASIC13.67□□□□□ -0.22
CFHR3Q02985 AL139327.4-201ENST00000612362 153 ntBASIC13.67□□□□□ -0.22
CFHR3Q02985 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CFHR3Q02985 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CFHR3Q02985 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CFHR3Q02985 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CFHR3Q02985 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CFHR3Q02985 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC13.67□□□□□ -0.22
CFHR3Q02985 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CFHR3Q02985 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC13.67□□□□□ -0.22
CFHR3Q02985 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CFHR3Q02985 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CFHR3Q02985 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CFHR3Q02985 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CFHR3Q02985 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CFHR3Q02985 HLA-A-201ENST00000376802 1334 ntBASIC13.66□□□□□ -0.22
CFHR3Q02985 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC13.66□□□□□ -0.22
CFHR3Q02985 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CFHR3Q02985 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CFHR3Q02985 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CFHR3Q02985 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CFHR3Q02985 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CFHR3Q02985 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC13.66□□□□□ -0.22
CFHR3Q02985 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CFHR3Q02985 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC13.66□□□□□ -0.22
CFHR3Q02985 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC13.66□□□□□ -0.22
CFHR3Q02985 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CFHR3Q02985 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CFHR3Q02985 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC13.66□□□□□ -0.22
CFHR3Q02985 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CFHR3Q02985 GNAS-203ENST00000306120 1878 ntBASIC13.66□□□□□ -0.22
CFHR3Q02985 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CFHR3Q02985 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CFHR3Q02985 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CFHR3Q02985 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CFHR3Q02985 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC13.66□□□□□ -0.22
CFHR3Q02985 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC13.66□□□□□ -0.22
CFHR3Q02985 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC13.66□□□□□ -0.22
CFHR3Q02985 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CFHR3Q02985 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CFHR3Q02985 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CFHR3Q02985 ENSA-206ENST00000361631 725 ntTSL 2 BASIC13.66□□□□□ -0.22
CFHR3Q02985 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.66□□□□□ -0.22
CFHR3Q02985 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CFHR3Q02985 AL031284.1-201ENST00000419297 478 ntBASIC13.66□□□□□ -0.22
CFHR3Q02985 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.66□□□□□ -0.22
CFHR3Q02985 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC13.66□□□□□ -0.22
CFHR3Q02985 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CFHR3Q02985 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.66□□□□□ -0.22
CFHR3Q02985 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.66□□□□□ -0.22
CFHR3Q02985 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.66□□□□□ -0.22
CFHR3Q02985 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.66□□□□□ -0.22
CFHR3Q02985 FAM215A-202ENST00000632077 792 ntBASIC13.66□□□□□ -0.22
CFHR3Q02985 CD276-203ENST00000537340 2439 ntTSL 2 BASIC13.66□□□□□ -0.22
CFHR3Q02985 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CFHR3Q02985 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC13.66□□□□□ -0.22
CFHR3Q02985 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CFHR3Q02985 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CFHR3Q02985 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CFHR3Q02985 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms