Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
IRX3P78415 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
IRX3P78415 METTL21AP1-201ENST00000438852 635 ntBASIC20.33■□□□□ 0.85
IRX3P78415 HCG4B-203ENST00000450128 991 ntBASIC20.33■□□□□ 0.85
IRX3P78415 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
IRX3P78415 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC20.33■□□□□ 0.85
IRX3P78415 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.33■□□□□ 0.85
IRX3P78415 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.33■□□□□ 0.85
IRX3P78415 AC004790.2-201ENST00000623588 572 ntBASIC20.33■□□□□ 0.85
IRX3P78415 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
IRX3P78415 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.33■□□□□ 0.85
IRX3P78415 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
IRX3P78415 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
IRX3P78415 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.33■□□□□ 0.84
IRX3P78415 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.33■□□□□ 0.84
IRX3P78415 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
IRX3P78415 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
IRX3P78415 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
IRX3P78415 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
IRX3P78415 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
IRX3P78415 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
IRX3P78415 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IRX3P78415 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IRX3P78415 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IRX3P78415 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IRX3P78415 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.32■□□□□ 0.84
IRX3P78415 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IRX3P78415 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.32■□□□□ 0.84
IRX3P78415 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
IRX3P78415 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.32■□□□□ 0.84
IRX3P78415 CD63-210ENST00000550776 870 ntTSL 5 BASIC20.32■□□□□ 0.84
IRX3P78415 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.32■□□□□ 0.84
IRX3P78415 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.32■□□□□ 0.84
IRX3P78415 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
IRX3P78415 AC109462.3-201ENST00000573934 613 ntBASIC20.32■□□□□ 0.84
IRX3P78415 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.32■□□□□ 0.84
IRX3P78415 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.32■□□□□ 0.84
IRX3P78415 AC116407.2-201ENST00000613639 860 ntBASIC20.32■□□□□ 0.84
IRX3P78415 C20orf181-201ENST00000623918 480 ntBASIC20.32■□□□□ 0.84
IRX3P78415 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC20.32■□□□□ 0.84
IRX3P78415 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
IRX3P78415 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
IRX3P78415 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
IRX3P78415 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
IRX3P78415 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
IRX3P78415 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
IRX3P78415 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IRX3P78415 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IRX3P78415 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
IRX3P78415 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IRX3P78415 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IRX3P78415 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IRX3P78415 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.31■□□□□ 0.84
IRX3P78415 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
IRX3P78415 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
IRX3P78415 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.31■□□□□ 0.84
IRX3P78415 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
IRX3P78415 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
IRX3P78415 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
IRX3P78415 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
IRX3P78415 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
IRX3P78415 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
IRX3P78415 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.31■□□□□ 0.84
IRX3P78415 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.31■□□□□ 0.84
IRX3P78415 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.31■□□□□ 0.84
IRX3P78415 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
IRX3P78415 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC20.31■□□□□ 0.84
IRX3P78415 AC019129.2-201ENST00000609837 1235 ntBASIC20.31■□□□□ 0.84
IRX3P78415 AL513190.1-201ENST00000621254 727 ntBASIC20.31■□□□□ 0.84
IRX3P78415 AL096828.2-201ENST00000567259 1965 ntBASIC20.31■□□□□ 0.84
IRX3P78415 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
IRX3P78415 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
IRX3P78415 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
IRX3P78415 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
IRX3P78415 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
IRX3P78415 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
IRX3P78415 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
IRX3P78415 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
IRX3P78415 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
IRX3P78415 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.31■□□□□ 0.84
IRX3P78415 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
IRX3P78415 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
IRX3P78415 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
IRX3P78415 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
IRX3P78415 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
IRX3P78415 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
IRX3P78415 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.3■□□□□ 0.84
IRX3P78415 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
IRX3P78415 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
IRX3P78415 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.3■□□□□ 0.84
IRX3P78415 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
IRX3P78415 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
IRX3P78415 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
IRX3P78415 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.3■□□□□ 0.84
IRX3P78415 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
IRX3P78415 AC254562.1-201ENST00000417586 456 ntBASIC20.3■□□□□ 0.84
IRX3P78415 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.3■□□□□ 0.84
IRX3P78415 HTR5BP-201ENST00000430851 1154 ntBASIC20.3■□□□□ 0.84
IRX3P78415 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
IRX3P78415 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms