Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 AC007292.2-201ENST00000593524 1812 ntBASIC13.41□□□□□ -0.26
SNRPEP62304 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SNRPEP62304 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
SNRPEP62304 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNRPEP62304 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNRPEP62304 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
SNRPEP62304 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNRPEP62304 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNRPEP62304 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNRPEP62304 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.41□□□□□ -0.26
SNRPEP62304 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNRPEP62304 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNRPEP62304 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNRPEP62304 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNRPEP62304 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.4□□□□□ -0.26
SNRPEP62304 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
SNRPEP62304 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.4□□□□□ -0.26
SNRPEP62304 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNRPEP62304 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNRPEP62304 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
SNRPEP62304 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC13.4□□□□□ -0.26
SNRPEP62304 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNRPEP62304 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC13.4□□□□□ -0.26
SNRPEP62304 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SNRPEP62304 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNRPEP62304 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SNRPEP62304 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC13.4□□□□□ -0.26
SNRPEP62304 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC13.4□□□□□ -0.26
SNRPEP62304 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
SNRPEP62304 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SNRPEP62304 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNRPEP62304 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNRPEP62304 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNRPEP62304 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC13.4□□□□□ -0.26
SNRPEP62304 RHBDF1P1-201ENST00000427504 1941 ntBASIC13.4□□□□□ -0.26
SNRPEP62304 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SNRPEP62304 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SNRPEP62304 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
SNRPEP62304 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SNRPEP62304 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
SNRPEP62304 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNRPEP62304 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNRPEP62304 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNRPEP62304 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SNRPEP62304 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SNRPEP62304 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SNRPEP62304 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
SNRPEP62304 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
SNRPEP62304 LINC00528-201ENST00000600723 2160 ntBASIC13.39□□□□□ -0.27
SNRPEP62304 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.39□□□□□ -0.27
SNRPEP62304 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNRPEP62304 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SNRPEP62304 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC13.39□□□□□ -0.27
SNRPEP62304 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNRPEP62304 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.39□□□□□ -0.27
SNRPEP62304 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.39□□□□□ -0.27
SNRPEP62304 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNRPEP62304 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SNRPEP62304 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC13.39□□□□□ -0.27
SNRPEP62304 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNRPEP62304 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNRPEP62304 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.39□□□□□ -0.27
SNRPEP62304 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNRPEP62304 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC13.39□□□□□ -0.27
SNRPEP62304 AC117489.1-201ENST00000625169 3217 ntBASIC13.39□□□□□ -0.27
SNRPEP62304 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNRPEP62304 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
SNRPEP62304 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC13.39□□□□□ -0.27
SNRPEP62304 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SNRPEP62304 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNRPEP62304 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNRPEP62304 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
SNRPEP62304 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SNRPEP62304 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNRPEP62304 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNRPEP62304 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.39□□□□□ -0.27
SNRPEP62304 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNRPEP62304 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNRPEP62304 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.39□□□□□ -0.27
SNRPEP62304 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.39□□□□□ -0.27
SNRPEP62304 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
SNRPEP62304 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC13.39□□□□□ -0.27
SNRPEP62304 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.39□□□□□ -0.27
SNRPEP62304 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SNRPEP62304 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC13.39□□□□□ -0.27
SNRPEP62304 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC13.39□□□□□ -0.27
SNRPEP62304 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNRPEP62304 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNRPEP62304 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNRPEP62304 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNRPEP62304 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SNRPEP62304 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNRPEP62304 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNRPEP62304 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
SNRPEP62304 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNRPEP62304 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
SNRPEP62304 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.38□□□□□ -0.27
SNRPEP62304 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNRPEP62304 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SNRPEP62304 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms