Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIMK2P53671 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIMK2P53671 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.65■□□□□ 0.42
LIMK2P53671 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LIMK2P53671 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LIMK2P53671 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
LIMK2P53671 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LIMK2P53671 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LIMK2P53671 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LIMK2P53671 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LIMK2P53671 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
LIMK2P53671 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LIMK2P53671 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LIMK2P53671 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LIMK2P53671 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LIMK2P53671 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LIMK2P53671 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LIMK2P53671 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
LIMK2P53671 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.65■□□□□ 0.42
LIMK2P53671 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.65■□□□□ 0.42
LIMK2P53671 FOSL1P1-201ENST00000511041 816 ntBASIC17.65■□□□□ 0.42
LIMK2P53671 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.65■□□□□ 0.42
LIMK2P53671 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.65■□□□□ 0.42
LIMK2P53671 AL732292.2-201ENST00000609649 430 ntBASIC17.65■□□□□ 0.42
LIMK2P53671 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LIMK2P53671 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
LIMK2P53671 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LIMK2P53671 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LIMK2P53671 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
LIMK2P53671 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.65■□□□□ 0.42
LIMK2P53671 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LIMK2P53671 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LIMK2P53671 AC233702.3-201ENST00000578656 1387 ntBASIC17.65■□□□□ 0.42
LIMK2P53671 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
LIMK2P53671 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LIMK2P53671 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LIMK2P53671 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LIMK2P53671 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LIMK2P53671 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LIMK2P53671 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
LIMK2P53671 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
LIMK2P53671 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.64■□□□□ 0.41
LIMK2P53671 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LIMK2P53671 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LIMK2P53671 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LIMK2P53671 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LIMK2P53671 LYSMD4-203ENST00000378904 2122 ntBASIC17.64■□□□□ 0.41
LIMK2P53671 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LIMK2P53671 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
LIMK2P53671 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
LIMK2P53671 KRT17P6-201ENST00000453795 1220 ntBASIC17.64■□□□□ 0.41
LIMK2P53671 AC074051.2-201ENST00000565115 352 ntBASIC17.64■□□□□ 0.41
LIMK2P53671 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.64■□□□□ 0.41
LIMK2P53671 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.64■□□□□ 0.41
LIMK2P53671 Z69720.1-201ENST00000601483 472 ntBASIC17.64■□□□□ 0.41
LIMK2P53671 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.64■□□□□ 0.41
LIMK2P53671 AC124864.1-201ENST00000623408 392 ntBASIC17.64■□□□□ 0.41
LIMK2P53671 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.64■□□□□ 0.41
LIMK2P53671 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LIMK2P53671 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.64■□□□□ 0.41
LIMK2P53671 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LIMK2P53671 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LIMK2P53671 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
LIMK2P53671 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LIMK2P53671 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LIMK2P53671 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
LIMK2P53671 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LIMK2P53671 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.64■□□□□ 0.41
LIMK2P53671 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.64■□□□□ 0.41
LIMK2P53671 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LIMK2P53671 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.63■□□□□ 0.41
LIMK2P53671 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
LIMK2P53671 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
LIMK2P53671 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LIMK2P53671 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LIMK2P53671 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
LIMK2P53671 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LIMK2P53671 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.63■□□□□ 0.41
LIMK2P53671 FDX1P1-201ENST00000449115 551 ntBASIC17.63■□□□□ 0.41
LIMK2P53671 RN7SL606P-201ENST00000472779 293 ntBASIC17.63■□□□□ 0.41
LIMK2P53671 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.63■□□□□ 0.41
LIMK2P53671 KRT18P31-201ENST00000506277 1292 ntBASIC17.63■□□□□ 0.41
LIMK2P53671 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.63■□□□□ 0.41
LIMK2P53671 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LIMK2P53671 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.63■□□□□ 0.41
LIMK2P53671 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LIMK2P53671 LINC01711-201ENST00000598340 967 ntBASIC17.63■□□□□ 0.41
LIMK2P53671 AL592071.1-201ENST00000611956 408 ntBASIC17.63■□□□□ 0.41
LIMK2P53671 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
LIMK2P53671 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LIMK2P53671 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LIMK2P53671 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.63■□□□□ 0.41
LIMK2P53671 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LIMK2P53671 AL353692.3-201ENST00000407031 1396 ntBASIC17.63■□□□□ 0.41
LIMK2P53671 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.63■□□□□ 0.41
LIMK2P53671 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LIMK2P53671 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LIMK2P53671 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LIMK2P53671 AC016396.2-201ENST00000562575 1417 ntBASIC17.63■□□□□ 0.41
LIMK2P53671 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms