Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF140P52738 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
ZNF140P52738 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF140P52738 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF140P52738 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF140P52738 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.39■□□□□ 0.37
ZNF140P52738 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ZNF140P52738 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ZNF140P52738 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
ZNF140P52738 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
ZNF140P52738 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
ZNF140P52738 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF140P52738 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF140P52738 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.39■□□□□ 0.37
ZNF140P52738 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF140P52738 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.39■□□□□ 0.37
ZNF140P52738 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF140P52738 AL020989.1-201ENST00000422979 469 ntBASIC17.39■□□□□ 0.37
ZNF140P52738 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.39■□□□□ 0.37
ZNF140P52738 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.39■□□□□ 0.37
ZNF140P52738 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.39■□□□□ 0.37
ZNF140P52738 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.39■□□□□ 0.37
ZNF140P52738 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF140P52738 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
ZNF140P52738 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF140P52738 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
ZNF140P52738 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
ZNF140P52738 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF140P52738 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF140P52738 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.39■□□□□ 0.37
ZNF140P52738 AC079776.2-201ENST00000641154 1609 ntBASIC17.39■□□□□ 0.37
ZNF140P52738 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
ZNF140P52738 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF140P52738 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
ZNF140P52738 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF140P52738 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.39■□□□□ 0.37
ZNF140P52738 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF140P52738 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ZNF140P52738 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.38■□□□□ 0.37
ZNF140P52738 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.38■□□□□ 0.37
ZNF140P52738 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF140P52738 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.38■□□□□ 0.37
ZNF140P52738 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ZNF140P52738 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ZNF140P52738 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF140P52738 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF140P52738 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF140P52738 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF140P52738 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ZNF140P52738 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
ZNF140P52738 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF140P52738 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.38■□□□□ 0.37
ZNF140P52738 AC091304.2-201ENST00000564639 760 ntBASIC17.38■□□□□ 0.37
ZNF140P52738 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.38■□□□□ 0.37
ZNF140P52738 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF140P52738 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF140P52738 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF140P52738 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF140P52738 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF140P52738 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF140P52738 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.38■□□□□ 0.37
ZNF140P52738 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.38■□□□□ 0.37
ZNF140P52738 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.38■□□□□ 0.37
ZNF140P52738 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF140P52738 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF140P52738 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.38■□□□□ 0.37
ZNF140P52738 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF140P52738 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.37■□□□□ 0.37
ZNF140P52738 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF140P52738 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.37■□□□□ 0.37
ZNF140P52738 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF140P52738 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF140P52738 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
ZNF140P52738 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF140P52738 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF140P52738 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ZNF140P52738 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.37■□□□□ 0.37
ZNF140P52738 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF140P52738 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
ZNF140P52738 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF140P52738 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF140P52738 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF140P52738 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF140P52738 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
ZNF140P52738 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF140P52738 RBM17P3-201ENST00000417687 1192 ntBASIC17.37■□□□□ 0.37
ZNF140P52738 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.37■□□□□ 0.37
ZNF140P52738 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.37■□□□□ 0.37
ZNF140P52738 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
ZNF140P52738 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.37■□□□□ 0.37
ZNF140P52738 AC093525.9-201ENST00000624961 1746 ntBASIC17.37■□□□□ 0.37
ZNF140P52738 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
ZNF140P52738 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.37■□□□□ 0.37
ZNF140P52738 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF140P52738 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF140P52738 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF140P52738 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
ZNF140P52738 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF140P52738 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF140P52738 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms