Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RFC1P35251 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RFC1P35251 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.46■□□□□ 0.55
RFC1P35251 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RFC1P35251 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
RFC1P35251 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RFC1P35251 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RFC1P35251 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.46■□□□□ 0.55
RFC1P35251 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
RFC1P35251 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RFC1P35251 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.46■□□□□ 0.55
RFC1P35251 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
RFC1P35251 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RFC1P35251 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.46■□□□□ 0.55
RFC1P35251 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RFC1P35251 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RFC1P35251 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.46■□□□□ 0.55
RFC1P35251 IGHV3-47-201ENST00000425060 335 ntBASIC18.46■□□□□ 0.55
RFC1P35251 ATP5G2P1-201ENST00000433580 426 ntBASIC18.46■□□□□ 0.55
RFC1P35251 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.46■□□□□ 0.55
RFC1P35251 KRT17P6-201ENST00000453795 1220 ntBASIC18.46■□□□□ 0.55
RFC1P35251 AC002558.1-201ENST00000488906 803 ntBASIC18.46■□□□□ 0.55
RFC1P35251 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.46■□□□□ 0.55
RFC1P35251 AC122714.2-201ENST00000502787 707 ntBASIC18.46■□□□□ 0.55
RFC1P35251 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.46■□□□□ 0.55
RFC1P35251 AC009533.2-201ENST00000543664 586 ntBASIC18.46■□□□□ 0.55
RFC1P35251 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
RFC1P35251 Z69720.1-201ENST00000601483 472 ntBASIC18.46■□□□□ 0.55
RFC1P35251 AC092119.3-201ENST00000612618 583 ntBASIC18.46■□□□□ 0.55
RFC1P35251 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.46■□□□□ 0.55
RFC1P35251 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.46■□□□□ 0.55
RFC1P35251 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.46■□□□□ 0.55
RFC1P35251 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RFC1P35251 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RFC1P35251 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RFC1P35251 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RFC1P35251 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RFC1P35251 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RFC1P35251 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RFC1P35251 AC012313.1-201ENST00000593393 3059 ntBASIC18.46■□□□□ 0.54
RFC1P35251 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.46■□□□□ 0.54
RFC1P35251 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
RFC1P35251 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
RFC1P35251 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.45■□□□□ 0.54
RFC1P35251 AL023806.1-201ENST00000603994 1649 ntBASIC18.45■□□□□ 0.54
RFC1P35251 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RFC1P35251 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.45■□□□□ 0.54
RFC1P35251 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RFC1P35251 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RFC1P35251 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RFC1P35251 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RFC1P35251 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RFC1P35251 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RFC1P35251 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RFC1P35251 FAM220CP-201ENST00000395253 831 ntBASIC18.45■□□□□ 0.54
RFC1P35251 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RFC1P35251 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.45■□□□□ 0.54
RFC1P35251 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.45■□□□□ 0.54
RFC1P35251 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RFC1P35251 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.45■□□□□ 0.54
RFC1P35251 AC109462.3-201ENST00000573934 613 ntBASIC18.45■□□□□ 0.54
RFC1P35251 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.45■□□□□ 0.54
RFC1P35251 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RFC1P35251 AL049757.1-201ENST00000616842 1596 ntBASIC18.45■□□□□ 0.54
RFC1P35251 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RFC1P35251 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RFC1P35251 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RFC1P35251 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.45■□□□□ 0.54
RFC1P35251 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RFC1P35251 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.45■□□□□ 0.54
RFC1P35251 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RFC1P35251 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RFC1P35251 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RFC1P35251 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RFC1P35251 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.45■□□□□ 0.54
RFC1P35251 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.45■□□□□ 0.54
RFC1P35251 TP73-AS1-210ENST00000637775 1455 ntBASIC18.45■□□□□ 0.54
RFC1P35251 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RFC1P35251 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RFC1P35251 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.45■□□□□ 0.54
RFC1P35251 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RFC1P35251 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFC1P35251 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
RFC1P35251 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RFC1P35251 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RFC1P35251 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RFC1P35251 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.44■□□□□ 0.54
RFC1P35251 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFC1P35251 NSUN5P1-202ENST00000421140 1535 ntBASIC18.44■□□□□ 0.54
RFC1P35251 NSUN5P2-203ENST00000457352 1529 ntBASIC18.44■□□□□ 0.54
RFC1P35251 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFC1P35251 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFC1P35251 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
RFC1P35251 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFC1P35251 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFC1P35251 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RFC1P35251 CROCCP1-201ENST00000426910 5675 ntBASIC18.44■□□□□ 0.54
RFC1P35251 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RFC1P35251 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFC1P35251 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms