Protein–RNA interactions for Protein: P30260

CDC27, Cell division cycle protein 27 homolog, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27P30260 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CDC27P30260 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDC27P30260 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.28■□□□□ 0.84
CDC27P30260 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.28■□□□□ 0.84
CDC27P30260 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.28■□□□□ 0.84
CDC27P30260 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.28■□□□□ 0.84
CDC27P30260 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.28■□□□□ 0.84
CDC27P30260 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.28■□□□□ 0.84
CDC27P30260 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDC27P30260 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.28■□□□□ 0.84
CDC27P30260 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CDC27P30260 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CDC27P30260 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDC27P30260 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.28■□□□□ 0.84
CDC27P30260 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDC27P30260 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDC27P30260 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CDC27P30260 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.28■□□□□ 0.84
CDC27P30260 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDC27P30260 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDC27P30260 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CDC27P30260 SIGLEC16-201ENST00000599858 1437 ntBASIC20.27■□□□□ 0.84
CDC27P30260 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.27■□□□□ 0.84
CDC27P30260 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.27■□□□□ 0.84
CDC27P30260 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDC27P30260 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDC27P30260 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDC27P30260 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDC27P30260 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CDC27P30260 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.27■□□□□ 0.84
CDC27P30260 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CDC27P30260 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.27■□□□□ 0.84
CDC27P30260 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDC27P30260 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDC27P30260 AP001094.4-201ENST00000579008 2176 ntBASIC20.27■□□□□ 0.84
CDC27P30260 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDC27P30260 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDC27P30260 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.27■□□□□ 0.84
CDC27P30260 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDC27P30260 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDC27P30260 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDC27P30260 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.27■□□□□ 0.84
CDC27P30260 MTDHP3-201ENST00000594186 672 ntBASIC20.27■□□□□ 0.84
CDC27P30260 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDC27P30260 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDC27P30260 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20.27■□□□□ 0.84
CDC27P30260 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CDC27P30260 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDC27P30260 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CDC27P30260 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDC27P30260 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CDC27P30260 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.83
CDC27P30260 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CDC27P30260 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CDC27P30260 AC020916.1-201ENST00000587762 1774 ntBASIC20.26■□□□□ 0.83
CDC27P30260 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CDC27P30260 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.26■□□□□ 0.83
CDC27P30260 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDC27P30260 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDC27P30260 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDC27P30260 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDC27P30260 AL020989.1-201ENST00000422979 469 ntBASIC20.26■□□□□ 0.83
CDC27P30260 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDC27P30260 FGFR3P6-201ENST00000457012 610 ntBASIC20.26■□□□□ 0.83
CDC27P30260 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.26■□□□□ 0.83
CDC27P30260 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
CDC27P30260 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.26■□□□□ 0.83
CDC27P30260 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDC27P30260 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.26■□□□□ 0.83
CDC27P30260 AL355877.3-201ENST00000622820 899 ntBASIC20.26■□□□□ 0.83
CDC27P30260 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDC27P30260 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDC27P30260 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDC27P30260 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDC27P30260 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDC27P30260 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDC27P30260 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CDC27P30260 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CDC27P30260 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.26■□□□□ 0.83
CDC27P30260 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDC27P30260 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CDC27P30260 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDC27P30260 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDC27P30260 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CDC27P30260 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDC27P30260 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC20.25■□□□□ 0.83
CDC27P30260 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CDC27P30260 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDC27P30260 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDC27P30260 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.25■□□□□ 0.83
CDC27P30260 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.25■□□□□ 0.83
CDC27P30260 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
CDC27P30260 EMBP1-201ENST00000458200 901 ntBASIC20.25■□□□□ 0.83
CDC27P30260 BX005266.1-201ENST00000473402 457 ntBASIC20.25■□□□□ 0.83
CDC27P30260 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDC27P30260 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDC27P30260 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.25■□□□□ 0.83
CDC27P30260 NKAPP1-205ENST00000585790 367 ntBASIC20.25■□□□□ 0.83
CDC27P30260 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CDC27P30260 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms