Protein–RNA interactions for Protein: P17302

GJA1, Gap junction alpha-1 protein, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GJA1P17302 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GJA1P17302 REXO1L11P-201ENST00000620964 1927 ntBASIC18.11■□□□□ 0.49
GJA1P17302 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.11■□□□□ 0.49
GJA1P17302 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
GJA1P17302 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.11■□□□□ 0.49
GJA1P17302 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GJA1P17302 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
GJA1P17302 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
GJA1P17302 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GJA1P17302 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.11■□□□□ 0.49
GJA1P17302 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GJA1P17302 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GJA1P17302 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.1■□□□□ 0.49
GJA1P17302 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GJA1P17302 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
GJA1P17302 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GJA1P17302 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GJA1P17302 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GJA1P17302 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GJA1P17302 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GJA1P17302 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
GJA1P17302 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.1■□□□□ 0.49
GJA1P17302 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GJA1P17302 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.1■□□□□ 0.49
GJA1P17302 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GJA1P17302 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.1■□□□□ 0.49
GJA1P17302 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GJA1P17302 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
GJA1P17302 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
GJA1P17302 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GJA1P17302 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.1■□□□□ 0.49
GJA1P17302 YBX1P5-201ENST00000509441 847 ntBASIC18.1■□□□□ 0.49
GJA1P17302 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.1■□□□□ 0.49
GJA1P17302 SNHG9-202ENST00000564014 471 ntBASIC18.1■□□□□ 0.49
GJA1P17302 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
GJA1P17302 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.1■□□□□ 0.49
GJA1P17302 C20orf181-201ENST00000623918 480 ntBASIC18.1■□□□□ 0.49
GJA1P17302 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
GJA1P17302 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.1■□□□□ 0.49
GJA1P17302 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.1■□□□□ 0.49
GJA1P17302 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
GJA1P17302 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
GJA1P17302 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GJA1P17302 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GJA1P17302 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GJA1P17302 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
GJA1P17302 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GJA1P17302 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.09■□□□□ 0.49
GJA1P17302 AC138028.4-201ENST00000564984 1845 ntBASIC18.09■□□□□ 0.49
GJA1P17302 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.09■□□□□ 0.49
GJA1P17302 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GJA1P17302 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GJA1P17302 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GJA1P17302 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GJA1P17302 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.09■□□□□ 0.49
GJA1P17302 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
GJA1P17302 KRT18P28-201ENST00000453838 1332 ntBASIC18.09■□□□□ 0.49
GJA1P17302 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.09■□□□□ 0.49
GJA1P17302 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GJA1P17302 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
GJA1P17302 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GJA1P17302 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.09■□□□□ 0.49
GJA1P17302 MYCLP1-201ENST00000372451 1075 ntBASIC18.09■□□□□ 0.49
GJA1P17302 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.09■□□□□ 0.49
GJA1P17302 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.09■□□□□ 0.49
GJA1P17302 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.09■□□□□ 0.49
GJA1P17302 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.09■□□□□ 0.49
GJA1P17302 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.09■□□□□ 0.49
GJA1P17302 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
GJA1P17302 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GJA1P17302 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.09■□□□□ 0.49
GJA1P17302 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GJA1P17302 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
GJA1P17302 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
GJA1P17302 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GJA1P17302 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GJA1P17302 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
GJA1P17302 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GJA1P17302 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
GJA1P17302 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GJA1P17302 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GJA1P17302 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.09■□□□□ 0.49
GJA1P17302 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.08■□□□□ 0.49
GJA1P17302 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
GJA1P17302 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
GJA1P17302 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.08■□□□□ 0.49
GJA1P17302 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
GJA1P17302 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.08■□□□□ 0.49
GJA1P17302 AC025580.3-201ENST00000617932 1424 ntBASIC18.08■□□□□ 0.49
GJA1P17302 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
GJA1P17302 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
GJA1P17302 AL590787.1-201ENST00000568856 1315 ntBASIC18.08■□□□□ 0.49
GJA1P17302 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
GJA1P17302 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
GJA1P17302 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
GJA1P17302 METTL21AP1-201ENST00000438852 635 ntBASIC18.08■□□□□ 0.48
GJA1P17302 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.08■□□□□ 0.48
GJA1P17302 KRT19P2-202ENST00000557173 1012 ntBASIC18.08■□□□□ 0.48
GJA1P17302 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
GJA1P17302 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms