Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPRP12270 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TPRP12270 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPRP12270 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPRP12270 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TPRP12270 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPRP12270 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.31■□□□□ 0.2
TPRP12270 MTMR9LP-203ENST00000426597 1545 ntBASIC16.31■□□□□ 0.2
TPRP12270 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TPRP12270 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPRP12270 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPRP12270 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TPRP12270 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPRP12270 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPRP12270 AC073592.8-201ENST00000624126 511 ntBASIC16.31■□□□□ 0.2
TPRP12270 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPRP12270 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPRP12270 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TPRP12270 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TPRP12270 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPRP12270 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TPRP12270 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPRP12270 AC090340.1-201ENST00000620778 4980 ntBASIC16.31■□□□□ 0.2
TPRP12270 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC16.31■□□□□ 0.2
TPRP12270 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPRP12270 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPRP12270 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TPRP12270 ANKRD19P-201ENST00000338192 862 ntBASIC16.3■□□□□ 0.2
TPRP12270 RN7SL589P-201ENST00000481268 310 ntBASIC16.3■□□□□ 0.2
TPRP12270 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.3■□□□□ 0.2
TPRP12270 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.3■□□□□ 0.2
TPRP12270 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TPRP12270 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.3■□□□□ 0.2
TPRP12270 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPRP12270 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TPRP12270 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TPRP12270 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPRP12270 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPRP12270 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TPRP12270 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPRP12270 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPRP12270 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.3■□□□□ 0.2
TPRP12270 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TPRP12270 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPRP12270 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPRP12270 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.3■□□□□ 0.2
TPRP12270 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
TPRP12270 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPRP12270 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPRP12270 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPRP12270 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.3■□□□□ 0.2
TPRP12270 FXNP2-201ENST00000411625 547 ntBASIC16.3■□□□□ 0.2
TPRP12270 AC234783.1-201ENST00000441761 496 ntBASIC16.3■□□□□ 0.2
TPRP12270 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.3■□□□□ 0.2
TPRP12270 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.3■□□□□ 0.2
TPRP12270 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.3■□□□□ 0.2
TPRP12270 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPRP12270 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TPRP12270 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPRP12270 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.3■□□□□ 0.2
TPRP12270 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.3■□□□□ 0.2
TPRP12270 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPRP12270 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TPRP12270 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPRP12270 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TPRP12270 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPRP12270 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPRP12270 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPRP12270 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPRP12270 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPRP12270 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TPRP12270 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TPRP12270 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TPRP12270 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPRP12270 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.29■□□□□ 0.2
TPRP12270 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPRP12270 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.29■□□□□ 0.2
TPRP12270 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TPRP12270 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TPRP12270 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.29■□□□□ 0.2
TPRP12270 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPRP12270 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPRP12270 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
TPRP12270 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TPRP12270 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TPRP12270 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.29■□□□□ 0.2
TPRP12270 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.29■□□□□ 0.2
TPRP12270 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.29■□□□□ 0.2
TPRP12270 SIRPAP1-201ENST00000448467 1770 ntBASIC16.29■□□□□ 0.2
TPRP12270 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPRP12270 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TPRP12270 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
TPRP12270 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.29■□□□□ 0.2
TPRP12270 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.29■□□□□ 0.2
TPRP12270 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.29■□□□□ 0.2
TPRP12270 BNIP3P42-201ENST00000454982 569 ntBASIC16.29■□□□□ 0.2
TPRP12270 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
TPRP12270 BNIP3P29-201ENST00000598302 571 ntBASIC16.29■□□□□ 0.2
TPRP12270 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.29■□□□□ 0.2
TPRP12270 AC011447.5-201ENST00000616168 564 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms