Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.74■□□□□ 0.43
HLA-DQB2P05538 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.74■□□□□ 0.43
HLA-DQB2P05538 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.74■□□□□ 0.43
HLA-DQB2P05538 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DQB2P05538 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
HLA-DQB2P05538 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DQB2P05538 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DQB2P05538 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
HLA-DQB2P05538 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
HLA-DQB2P05538 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DQB2P05538 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
HLA-DQB2P05538 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.74■□□□□ 0.43
HLA-DQB2P05538 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.74■□□□□ 0.43
HLA-DQB2P05538 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
HLA-DQB2P05538 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
HLA-DQB2P05538 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.73■□□□□ 0.43
HLA-DQB2P05538 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.73■□□□□ 0.43
HLA-DQB2P05538 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DQB2P05538 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.73■□□□□ 0.43
HLA-DQB2P05538 AC016396.2-201ENST00000562575 1417 ntBASIC17.73■□□□□ 0.43
HLA-DQB2P05538 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.73■□□□□ 0.43
HLA-DQB2P05538 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DQB2P05538 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.73■□□□□ 0.43
HLA-DQB2P05538 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DQB2P05538 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.73■□□□□ 0.43
HLA-DQB2P05538 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.73■□□□□ 0.43
HLA-DQB2P05538 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.73■□□□□ 0.43
HLA-DQB2P05538 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.73■□□□□ 0.43
HLA-DQB2P05538 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.73■□□□□ 0.43
HLA-DQB2P05538 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.73■□□□□ 0.43
HLA-DQB2P05538 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.73■□□□□ 0.43
HLA-DQB2P05538 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.73■□□□□ 0.43
HLA-DQB2P05538 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.73■□□□□ 0.43
HLA-DQB2P05538 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.73■□□□□ 0.43
HLA-DQB2P05538 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DQB2P05538 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.73■□□□□ 0.43
HLA-DQB2P05538 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
HLA-DQB2P05538 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
HLA-DQB2P05538 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DQB2P05538 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQB2P05538 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQB2P05538 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
HLA-DQB2P05538 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.72■□□□□ 0.43
HLA-DQB2P05538 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQB2P05538 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.72■□□□□ 0.43
HLA-DQB2P05538 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQB2P05538 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.72■□□□□ 0.43
HLA-DQB2P05538 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.72■□□□□ 0.43
HLA-DQB2P05538 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQB2P05538 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQB2P05538 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQB2P05538 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQB2P05538 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQB2P05538 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQB2P05538 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQB2P05538 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQB2P05538 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.72■□□□□ 0.43
HLA-DQB2P05538 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQB2P05538 AC091304.2-201ENST00000564639 760 ntBASIC17.72■□□□□ 0.43
HLA-DQB2P05538 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.72■□□□□ 0.43
HLA-DQB2P05538 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQB2P05538 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQB2P05538 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQB2P05538 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQB2P05538 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.72■□□□□ 0.43
HLA-DQB2P05538 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQB2P05538 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQB2P05538 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQB2P05538 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQB2P05538 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQB2P05538 AP005117.1-201ENST00000584346 1413 ntBASIC17.72■□□□□ 0.43
HLA-DQB2P05538 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQB2P05538 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
HLA-DQB2P05538 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQB2P05538 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.71■□□□□ 0.43
HLA-DQB2P05538 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQB2P05538 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
HLA-DQB2P05538 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQB2P05538 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
HLA-DQB2P05538 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQB2P05538 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQB2P05538 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQB2P05538 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQB2P05538 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
HLA-DQB2P05538 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQB2P05538 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.71■□□□□ 0.43
HLA-DQB2P05538 SLC25A1P3-201ENST00000395415 828 ntBASIC17.71■□□□□ 0.43
HLA-DQB2P05538 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQB2P05538 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.71■□□□□ 0.43
HLA-DQB2P05538 SPDYE21P-201ENST00000413323 827 ntBASIC17.71■□□□□ 0.43
HLA-DQB2P05538 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.71■□□□□ 0.43
HLA-DQB2P05538 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.71■□□□□ 0.43
HLA-DQB2P05538 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
HLA-DQB2P05538 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.71■□□□□ 0.43
HLA-DQB2P05538 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.71■□□□□ 0.43
HLA-DQB2P05538 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQB2P05538 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQB2P05538 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQB2P05538 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQB2P05538 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms