Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DPB1P04440 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DPB1P04440 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.77■□□□□ 0.12
HLA-DPB1P04440 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DPB1P04440 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DPB1P04440 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.77■□□□□ 0.12
HLA-DPB1P04440 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.77■□□□□ 0.12
HLA-DPB1P04440 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.77■□□□□ 0.12
HLA-DPB1P04440 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.77■□□□□ 0.12
HLA-DPB1P04440 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DPB1P04440 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HLA-DPB1P04440 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HLA-DPB1P04440 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.11
HLA-DPB1P04440 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.77■□□□□ 0.11
HLA-DPB1P04440 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HLA-DPB1P04440 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.11
HLA-DPB1P04440 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.77■□□□□ 0.11
HLA-DPB1P04440 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
HLA-DPB1P04440 AC073508.3-201ENST00000619697 1419 ntBASIC15.77■□□□□ 0.11
HLA-DPB1P04440 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.77■□□□□ 0.11
HLA-DPB1P04440 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DPB1P04440 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DPB1P04440 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DPB1P04440 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.76■□□□□ 0.11
HLA-DPB1P04440 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.76■□□□□ 0.11
HLA-DPB1P04440 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DPB1P04440 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
HLA-DPB1P04440 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.76■□□□□ 0.11
HLA-DPB1P04440 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DPB1P04440 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.76■□□□□ 0.11
HLA-DPB1P04440 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DPB1P04440 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DPB1P04440 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DPB1P04440 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DPB1P04440 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.76■□□□□ 0.11
HLA-DPB1P04440 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DPB1P04440 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.76■□□□□ 0.11
HLA-DPB1P04440 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.76■□□□□ 0.11
HLA-DPB1P04440 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.76■□□□□ 0.11
HLA-DPB1P04440 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DPB1P04440 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.76■□□□□ 0.11
HLA-DPB1P04440 NEK4P2-201ENST00000580004 1012 ntBASIC15.76■□□□□ 0.11
HLA-DPB1P04440 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.76■□□□□ 0.11
HLA-DPB1P04440 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.76■□□□□ 0.11
HLA-DPB1P04440 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DPB1P04440 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.76■□□□□ 0.11
HLA-DPB1P04440 DOC2GP-204ENST00000639052 2548 ntBASIC15.76■□□□□ 0.11
HLA-DPB1P04440 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DPB1P04440 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DPB1P04440 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DPB1P04440 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DPB1P04440 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DPB1P04440 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
HLA-DPB1P04440 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DPB1P04440 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DPB1P04440 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DPB1P04440 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DPB1P04440 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
HLA-DPB1P04440 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 AC104390.1-201ENST00000555663 520 ntBASIC15.75■□□□□ 0.11
HLA-DPB1P04440 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 MIR3180-4-201ENST00000582223 153 ntBASIC15.75■□□□□ 0.11
HLA-DPB1P04440 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 AC140113.3-201ENST00000605663 199 ntBASIC15.75■□□□□ 0.11
HLA-DPB1P04440 AC139887.4-201ENST00000607877 719 ntBASIC15.75■□□□□ 0.11
HLA-DPB1P04440 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.75■□□□□ 0.11
HLA-DPB1P04440 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms