Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
MT-ND1P03886 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MT-ND1P03886 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.55■□□□□ 0.24
MT-ND1P03886 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MT-ND1P03886 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.55■□□□□ 0.24
MT-ND1P03886 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.55■□□□□ 0.24
MT-ND1P03886 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.55■□□□□ 0.24
MT-ND1P03886 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.55■□□□□ 0.24
MT-ND1P03886 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.55■□□□□ 0.24
MT-ND1P03886 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.55■□□□□ 0.24
MT-ND1P03886 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MT-ND1P03886 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MT-ND1P03886 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
MT-ND1P03886 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.55■□□□□ 0.24
MT-ND1P03886 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MT-ND1P03886 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.54■□□□□ 0.24
MT-ND1P03886 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
MT-ND1P03886 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
MT-ND1P03886 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.54■□□□□ 0.24
MT-ND1P03886 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.54■□□□□ 0.24
MT-ND1P03886 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MT-ND1P03886 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.54■□□□□ 0.24
MT-ND1P03886 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MT-ND1P03886 INGX-201ENST00000359239 846 ntBASIC16.54■□□□□ 0.24
MT-ND1P03886 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
MT-ND1P03886 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
MT-ND1P03886 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.54■□□□□ 0.24
MT-ND1P03886 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.54■□□□□ 0.24
MT-ND1P03886 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.54■□□□□ 0.24
MT-ND1P03886 NAPSB-206ENST00000562112 1266 ntBASIC16.54■□□□□ 0.24
MT-ND1P03886 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
MT-ND1P03886 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.54■□□□□ 0.24
MT-ND1P03886 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.54■□□□□ 0.24
MT-ND1P03886 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
MT-ND1P03886 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MT-ND1P03886 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MT-ND1P03886 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
MT-ND1P03886 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MT-ND1P03886 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MT-ND1P03886 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MT-ND1P03886 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MT-ND1P03886 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
MT-ND1P03886 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.54■□□□□ 0.24
MT-ND1P03886 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MT-ND1P03886 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.54■□□□□ 0.24
MT-ND1P03886 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.54■□□□□ 0.24
MT-ND1P03886 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MT-ND1P03886 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MT-ND1P03886 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MT-ND1P03886 CYP2D8P-201ENST00000433633 1490 ntBASIC16.54■□□□□ 0.24
MT-ND1P03886 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
MT-ND1P03886 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MT-ND1P03886 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MT-ND1P03886 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MT-ND1P03886 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.53■□□□□ 0.24
MT-ND1P03886 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.53■□□□□ 0.24
MT-ND1P03886 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MT-ND1P03886 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MT-ND1P03886 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MT-ND1P03886 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
MT-ND1P03886 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MT-ND1P03886 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MT-ND1P03886 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
MT-ND1P03886 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.53■□□□□ 0.24
MT-ND1P03886 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
MT-ND1P03886 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.53■□□□□ 0.24
MT-ND1P03886 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MT-ND1P03886 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MT-ND1P03886 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MT-ND1P03886 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.53■□□□□ 0.24
MT-ND1P03886 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MT-ND1P03886 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MT-ND1P03886 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.53■□□□□ 0.24
MT-ND1P03886 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.53■□□□□ 0.24
MT-ND1P03886 AL512604.3-201ENST00000569583 964 ntBASIC16.53■□□□□ 0.24
MT-ND1P03886 AC010947.1-201ENST00000623454 693 ntBASIC16.53■□□□□ 0.24
MT-ND1P03886 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MT-ND1P03886 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
MT-ND1P03886 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.53■□□□□ 0.24
MT-ND1P03886 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MT-ND1P03886 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MT-ND1P03886 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
MT-ND1P03886 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.53■□□□□ 0.24
MT-ND1P03886 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MT-ND1P03886 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
MT-ND1P03886 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.53■□□□□ 0.24
MT-ND1P03886 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
MT-ND1P03886 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MT-ND1P03886 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MT-ND1P03886 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MT-ND1P03886 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MT-ND1P03886 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
MT-ND1P03886 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MT-ND1P03886 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MT-ND1P03886 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.52■□□□□ 0.24
MT-ND1P03886 LYSMD4-203ENST00000378904 2122 ntBASIC16.52■□□□□ 0.24
MT-ND1P03886 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MT-ND1P03886 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
MT-ND1P03886 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.52■□□□□ 0.24
MT-ND1P03886 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms