Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
PFDN1O60925 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PFDN1O60925 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PFDN1O60925 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PFDN1O60925 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
PFDN1O60925 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PFDN1O60925 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PFDN1O60925 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.63■□□□□ 0.09
PFDN1O60925 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PFDN1O60925 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
PFDN1O60925 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PFDN1O60925 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PFDN1O60925 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PFDN1O60925 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PFDN1O60925 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PFDN1O60925 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PFDN1O60925 AC133561.4-201ENST00000566112 224 ntBASIC15.63■□□□□ 0.09
PFDN1O60925 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
PFDN1O60925 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PFDN1O60925 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.63■□□□□ 0.09
PFDN1O60925 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.63■□□□□ 0.09
PFDN1O60925 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.63■□□□□ 0.09
PFDN1O60925 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PFDN1O60925 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.63■□□□□ 0.09
PFDN1O60925 AC018553.1-201ENST00000616682 1458 ntBASIC15.63■□□□□ 0.09
PFDN1O60925 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PFDN1O60925 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PFDN1O60925 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PFDN1O60925 AC005089.1-201ENST00000619486 2241 ntBASIC15.63■□□□□ 0.09
PFDN1O60925 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
PFDN1O60925 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.63■□□□□ 0.09
PFDN1O60925 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.63■□□□□ 0.09
PFDN1O60925 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PFDN1O60925 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PFDN1O60925 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PFDN1O60925 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PFDN1O60925 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PFDN1O60925 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC15.62■□□□□ 0.09
PFDN1O60925 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
PFDN1O60925 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.62■□□□□ 0.09
PFDN1O60925 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PFDN1O60925 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PFDN1O60925 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PFDN1O60925 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PFDN1O60925 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PFDN1O60925 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PFDN1O60925 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PFDN1O60925 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PFDN1O60925 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.62■□□□□ 0.09
PFDN1O60925 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.62■□□□□ 0.09
PFDN1O60925 RNF216P1-203ENST00000404404 2427 ntBASIC15.62■□□□□ 0.09
PFDN1O60925 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PFDN1O60925 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.62■□□□□ 0.09
PFDN1O60925 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PFDN1O60925 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC15.62■□□□□ 0.09
PFDN1O60925 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC15.62■□□□□ 0.09
PFDN1O60925 AC011298.3-201ENST00000615796 283 ntBASIC15.62■□□□□ 0.09
PFDN1O60925 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
PFDN1O60925 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PFDN1O60925 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PFDN1O60925 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PFDN1O60925 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PFDN1O60925 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.62■□□□□ 0.09
PFDN1O60925 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PFDN1O60925 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PFDN1O60925 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
PFDN1O60925 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PFDN1O60925 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
PFDN1O60925 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.62■□□□□ 0.09
PFDN1O60925 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PFDN1O60925 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PFDN1O60925 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PFDN1O60925 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.62■□□□□ 0.09
PFDN1O60925 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PFDN1O60925 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PFDN1O60925 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PFDN1O60925 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
PFDN1O60925 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
PFDN1O60925 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PFDN1O60925 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PFDN1O60925 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PFDN1O60925 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PFDN1O60925 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PFDN1O60925 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PFDN1O60925 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.61■□□□□ 0.09
PFDN1O60925 AC107918.4-201ENST00000641966 3141 ntBASIC15.61■□□□□ 0.09
PFDN1O60925 SNX3-202ENST00000349379 890 ntTSL 2 BASIC15.61■□□□□ 0.09
PFDN1O60925 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC15.61■□□□□ 0.09
PFDN1O60925 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC15.61■□□□□ 0.09
PFDN1O60925 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PFDN1O60925 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PFDN1O60925 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PFDN1O60925 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PFDN1O60925 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.61■□□□□ 0.09
PFDN1O60925 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PFDN1O60925 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PFDN1O60925 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PFDN1O60925 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
PFDN1O60925 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PFDN1O60925 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms