Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.67■□□□□ 0.26
CLOCKO15516 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.67■□□□□ 0.26
CLOCKO15516 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLOCKO15516 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLOCKO15516 AC022898.2-201ENST00000616822 1312 ntBASIC16.67■□□□□ 0.26
CLOCKO15516 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLOCKO15516 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLOCKO15516 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLOCKO15516 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLOCKO15516 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
CLOCKO15516 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLOCKO15516 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLOCKO15516 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.66■□□□□ 0.26
CLOCKO15516 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLOCKO15516 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLOCKO15516 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CLOCKO15516 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLOCKO15516 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CLOCKO15516 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.66■□□□□ 0.26
CLOCKO15516 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
CLOCKO15516 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLOCKO15516 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLOCKO15516 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLOCKO15516 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLOCKO15516 INGX-201ENST00000359239 846 ntBASIC16.66■□□□□ 0.26
CLOCKO15516 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLOCKO15516 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLOCKO15516 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLOCKO15516 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLOCKO15516 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLOCKO15516 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CLOCKO15516 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLOCKO15516 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.66■□□□□ 0.26
CLOCKO15516 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLOCKO15516 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.66■□□□□ 0.26
CLOCKO15516 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.66■□□□□ 0.26
CLOCKO15516 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.66■□□□□ 0.26
CLOCKO15516 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.66■□□□□ 0.26
CLOCKO15516 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.66■□□□□ 0.26
CLOCKO15516 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLOCKO15516 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLOCKO15516 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.66■□□□□ 0.26
CLOCKO15516 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.66■□□□□ 0.26
CLOCKO15516 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLOCKO15516 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CLOCKO15516 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.66■□□□□ 0.26
CLOCKO15516 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLOCKO15516 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.65■□□□□ 0.26
CLOCKO15516 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLOCKO15516 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.65■□□□□ 0.26
CLOCKO15516 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLOCKO15516 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CLOCKO15516 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.65■□□□□ 0.26
CLOCKO15516 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLOCKO15516 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLOCKO15516 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLOCKO15516 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
CLOCKO15516 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.65■□□□□ 0.26
CLOCKO15516 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLOCKO15516 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLOCKO15516 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.65■□□□□ 0.26
CLOCKO15516 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLOCKO15516 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CLOCKO15516 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLOCKO15516 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.65■□□□□ 0.26
CLOCKO15516 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.65■□□□□ 0.26
CLOCKO15516 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CLOCKO15516 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.65■□□□□ 0.26
CLOCKO15516 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.65■□□□□ 0.26
CLOCKO15516 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLOCKO15516 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CLOCKO15516 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLOCKO15516 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLOCKO15516 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLOCKO15516 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLOCKO15516 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLOCKO15516 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLOCKO15516 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.65■□□□□ 0.26
CLOCKO15516 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.65■□□□□ 0.26
CLOCKO15516 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLOCKO15516 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CLOCKO15516 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLOCKO15516 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CLOCKO15516 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
CLOCKO15516 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CLOCKO15516 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLOCKO15516 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CLOCKO15516 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CLOCKO15516 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.64■□□□□ 0.26
CLOCKO15516 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CLOCKO15516 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
CLOCKO15516 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CLOCKO15516 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLOCKO15516 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLOCKO15516 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.64■□□□□ 0.25
CLOCKO15516 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLOCKO15516 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.64■□□□□ 0.25
CLOCKO15516 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLOCKO15516 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CLOCKO15516 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms