Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
O00370 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
O00370 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
O00370 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
O00370 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.66■□□□□ 0.58
O00370 KRT8P10-201ENST00000450021 1447 ntBASIC18.66■□□□□ 0.58
O00370 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
O00370 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
O00370 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
O00370 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
O00370 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
O00370 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
O00370 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.66■□□□□ 0.58
O00370 PCDHA12-202ENST00000613593 2588 ntBASIC18.66■□□□□ 0.58
O00370 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
O00370 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
O00370 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.66■□□□□ 0.58
O00370 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
O00370 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
O00370 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
O00370 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.66■□□□□ 0.58
O00370 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
O00370 DUSP5P1-201ENST00000441325 1139 ntBASIC18.66■□□□□ 0.58
O00370 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.66■□□□□ 0.58
O00370 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.66■□□□□ 0.58
O00370 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.66■□□□□ 0.58
O00370 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.66■□□□□ 0.58
O00370 AL732292.2-201ENST00000609649 430 ntBASIC18.66■□□□□ 0.58
O00370 AD001527.2-201ENST00000622994 785 ntBASIC18.66■□□□□ 0.58
O00370 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.66■□□□□ 0.58
O00370 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
O00370 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
O00370 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
O00370 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
O00370 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
O00370 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
O00370 AL353593.2-201ENST00000602529 1483 ntBASIC18.65■□□□□ 0.58
O00370 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.65■□□□□ 0.58
O00370 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
O00370 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
O00370 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
O00370 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.65■□□□□ 0.58
O00370 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.65■□□□□ 0.58
O00370 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
O00370 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.65■□□□□ 0.58
O00370 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.65■□□□□ 0.58
O00370 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
O00370 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.65■□□□□ 0.58
O00370 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.65■□□□□ 0.58
O00370 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.65■□□□□ 0.58
O00370 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
O00370 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
O00370 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.65■□□□□ 0.58
O00370 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
O00370 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
O00370 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
O00370 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
O00370 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
O00370 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
O00370 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
O00370 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
O00370 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
O00370 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
O00370 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.65■□□□□ 0.58
O00370 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
O00370 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
O00370 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
O00370 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.64■□□□□ 0.58
O00370 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
O00370 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
O00370 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
O00370 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
O00370 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
O00370 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
O00370 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
O00370 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
O00370 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.64■□□□□ 0.57
O00370 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
O00370 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
O00370 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.64■□□□□ 0.57
O00370 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.64■□□□□ 0.57
O00370 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.64■□□□□ 0.57
O00370 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.64■□□□□ 0.57
O00370 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
O00370 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
O00370 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.64■□□□□ 0.57
O00370 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
O00370 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
O00370 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.64■□□□□ 0.57
O00370 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
O00370 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
O00370 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
O00370 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
O00370 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.64■□□□□ 0.57
O00370 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
O00370 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
O00370 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
O00370 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
O00370 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
O00370 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms