Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TBC1D3FA6NER0 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TBC1D3FA6NER0 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TBC1D3FA6NER0 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.41■□□□□ 0.38
TBC1D3FA6NER0 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 YBX2P1-201ENST00000394192 760 ntBASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 DNAJB3-201ENST00000446806 729 ntBASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TBC1D3FA6NER0 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.39■□□□□ 0.38
TBC1D3FA6NER0 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TBC1D3FA6NER0 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.39■□□□□ 0.38
TBC1D3FA6NER0 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
TBC1D3FA6NER0 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
TBC1D3FA6NER0 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.39■□□□□ 0.38
TBC1D3FA6NER0 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TBC1D3FA6NER0 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.39■□□□□ 0.37
TBC1D3FA6NER0 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
TBC1D3FA6NER0 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
TBC1D3FA6NER0 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TBC1D3FA6NER0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TBC1D3FA6NER0 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.39■□□□□ 0.37
TBC1D3FA6NER0 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TBC1D3FA6NER0 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.39■□□□□ 0.37
TBC1D3FA6NER0 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.39■□□□□ 0.37
TBC1D3FA6NER0 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.39■□□□□ 0.37
TBC1D3FA6NER0 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TBC1D3FA6NER0 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TBC1D3FA6NER0 AC108073.2-201ENST00000464002 357 ntBASIC17.39■□□□□ 0.37
TBC1D3FA6NER0 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.39■□□□□ 0.37
TBC1D3FA6NER0 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.39■□□□□ 0.37
TBC1D3FA6NER0 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TBC1D3FA6NER0 AC002347.1-201ENST00000569543 541 ntBASIC17.39■□□□□ 0.37
TBC1D3FA6NER0 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.39■□□□□ 0.37
TBC1D3FA6NER0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.39■□□□□ 0.37
TBC1D3FA6NER0 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.39■□□□□ 0.37
TBC1D3FA6NER0 AL691403.2-201ENST00000618460 490 ntBASIC17.39■□□□□ 0.37
TBC1D3FA6NER0 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TBC1D3FA6NER0 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TBC1D3FA6NER0 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.39■□□□□ 0.37
TBC1D3FA6NER0 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TBC1D3FA6NER0 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.39■□□□□ 0.37
TBC1D3FA6NER0 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.39■□□□□ 0.37
TBC1D3FA6NER0 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.39■□□□□ 0.37
TBC1D3FA6NER0 ABALON-201ENST00000629058 1903 ntBASIC17.39■□□□□ 0.37
TBC1D3FA6NER0 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TBC1D3FA6NER0 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TBC1D3FA6NER0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TBC1D3FA6NER0 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms