Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RCCD1A6NED2 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RCCD1A6NED2 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RCCD1A6NED2 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RCCD1A6NED2 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RCCD1A6NED2 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RCCD1A6NED2 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RCCD1A6NED2 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RCCD1A6NED2 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RCCD1A6NED2 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RCCD1A6NED2 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RCCD1A6NED2 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RCCD1A6NED2 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RCCD1A6NED2 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.61■□□□□ 0.57
RCCD1A6NED2 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RCCD1A6NED2 STARP1-201ENST00000397973 869 ntBASIC18.61■□□□□ 0.57
RCCD1A6NED2 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.61■□□□□ 0.57
RCCD1A6NED2 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RCCD1A6NED2 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RCCD1A6NED2 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RCCD1A6NED2 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RCCD1A6NED2 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RCCD1A6NED2 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
RCCD1A6NED2 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
RCCD1A6NED2 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RCCD1A6NED2 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RCCD1A6NED2 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RCCD1A6NED2 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RCCD1A6NED2 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RCCD1A6NED2 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.6■□□□□ 0.57
RCCD1A6NED2 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RCCD1A6NED2 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
RCCD1A6NED2 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RCCD1A6NED2 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RCCD1A6NED2 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RCCD1A6NED2 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RCCD1A6NED2 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.6■□□□□ 0.57
RCCD1A6NED2 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RCCD1A6NED2 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RCCD1A6NED2 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RCCD1A6NED2 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RCCD1A6NED2 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RCCD1A6NED2 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RCCD1A6NED2 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
RCCD1A6NED2 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.6■□□□□ 0.57
RCCD1A6NED2 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RCCD1A6NED2 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RCCD1A6NED2 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RCCD1A6NED2 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.6■□□□□ 0.57
RCCD1A6NED2 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.6■□□□□ 0.57
RCCD1A6NED2 AL596275.1-201ENST00000423464 877 ntBASIC18.6■□□□□ 0.57
RCCD1A6NED2 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.6■□□□□ 0.57
RCCD1A6NED2 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.6■□□□□ 0.57
RCCD1A6NED2 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.6■□□□□ 0.57
RCCD1A6NED2 AP003733.1-201ENST00000491725 852 ntBASIC18.6■□□□□ 0.57
RCCD1A6NED2 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.6■□□□□ 0.57
RCCD1A6NED2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.6■□□□□ 0.57
RCCD1A6NED2 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RCCD1A6NED2 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RCCD1A6NED2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RCCD1A6NED2 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RCCD1A6NED2 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RCCD1A6NED2 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RCCD1A6NED2 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.59■□□□□ 0.57
RCCD1A6NED2 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.59■□□□□ 0.57
RCCD1A6NED2 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
RCCD1A6NED2 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RCCD1A6NED2 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RCCD1A6NED2 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.59■□□□□ 0.57
RCCD1A6NED2 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RCCD1A6NED2 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RCCD1A6NED2 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
RCCD1A6NED2 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.59■□□□□ 0.57
RCCD1A6NED2 KRT18P38-201ENST00000449496 1282 ntBASIC18.59■□□□□ 0.57
RCCD1A6NED2 COX11P1-201ENST00000489116 835 ntBASIC18.59■□□□□ 0.57
RCCD1A6NED2 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RCCD1A6NED2 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.59■□□□□ 0.57
RCCD1A6NED2 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.59■□□□□ 0.57
RCCD1A6NED2 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.59■□□□□ 0.57
RCCD1A6NED2 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.59■□□□□ 0.57
RCCD1A6NED2 AC008741.2-201ENST00000612792 3115 ntBASIC18.59■□□□□ 0.57
RCCD1A6NED2 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.59■□□□□ 0.57
RCCD1A6NED2 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RCCD1A6NED2 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
RCCD1A6NED2 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RCCD1A6NED2 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RCCD1A6NED2 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RCCD1A6NED2 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RCCD1A6NED2 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.57
RCCD1A6NED2 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.58■□□□□ 0.57
RCCD1A6NED2 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
RCCD1A6NED2 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RCCD1A6NED2 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
RCCD1A6NED2 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RCCD1A6NED2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
RCCD1A6NED2 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RCCD1A6NED2 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RCCD1A6NED2 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.58■□□□□ 0.57
RCCD1A6NED2 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RCCD1A6NED2 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms