Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TCRBV9S1A1TA0A576 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TCRBV9S1A1TA0A576 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV9S1A1TA0A576 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV9S1A1TA0A576 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
TCRBV9S1A1TA0A576 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV9S1A1TA0A576 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV9S1A1TA0A576 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TCRBV9S1A1TA0A576 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TCRBV9S1A1TA0A576 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.62■□□□□ 0.41
TCRBV9S1A1TA0A576 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV9S1A1TA0A576 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV9S1A1TA0A576 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TCRBV9S1A1TA0A576 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV9S1A1TA0A576 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV9S1A1TA0A576 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV9S1A1TA0A576 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV9S1A1TA0A576 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV9S1A1TA0A576 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
TCRBV9S1A1TA0A576 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.62■□□□□ 0.41
TCRBV9S1A1TA0A576 TERF1P1-201ENST00000311003 1181 ntBASIC17.62■□□□□ 0.41
TCRBV9S1A1TA0A576 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TCRBV9S1A1TA0A576 AC113347.1-201ENST00000413321 391 ntBASIC17.62■□□□□ 0.41
TCRBV9S1A1TA0A576 AC117947.1-201ENST00000427448 529 ntBASIC17.62■□□□□ 0.41
TCRBV9S1A1TA0A576 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.62■□□□□ 0.41
TCRBV9S1A1TA0A576 KRT18P38-201ENST00000449496 1282 ntBASIC17.62■□□□□ 0.41
TCRBV9S1A1TA0A576 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.62■□□□□ 0.41
TCRBV9S1A1TA0A576 AL359075.1-203ENST00000462729 1002 ntBASIC17.62■□□□□ 0.41
TCRBV9S1A1TA0A576 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV9S1A1TA0A576 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV9S1A1TA0A576 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.62■□□□□ 0.41
TCRBV9S1A1TA0A576 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
TCRBV9S1A1TA0A576 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.62■□□□□ 0.41
TCRBV9S1A1TA0A576 AL390719.2-201ENST00000606993 987 ntBASIC17.62■□□□□ 0.41
TCRBV9S1A1TA0A576 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV9S1A1TA0A576 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.62■□□□□ 0.41
TCRBV9S1A1TA0A576 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV9S1A1TA0A576 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV9S1A1TA0A576 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV9S1A1TA0A576 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV9S1A1TA0A576 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TCRBV9S1A1TA0A576 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TCRBV9S1A1TA0A576 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV9S1A1TA0A576 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV9S1A1TA0A576 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.62■□□□□ 0.41
TCRBV9S1A1TA0A576 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.62■□□□□ 0.41
TCRBV9S1A1TA0A576 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV9S1A1TA0A576 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV9S1A1TA0A576 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV9S1A1TA0A576 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.61■□□□□ 0.41
TCRBV9S1A1TA0A576 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TCRBV9S1A1TA0A576 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
TCRBV9S1A1TA0A576 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV9S1A1TA0A576 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TCRBV9S1A1TA0A576 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV9S1A1TA0A576 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TCRBV9S1A1TA0A576 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV9S1A1TA0A576 AC018695.7-201ENST00000624587 2492 ntBASIC17.61■□□□□ 0.41
TCRBV9S1A1TA0A576 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV9S1A1TA0A576 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TCRBV9S1A1TA0A576 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV9S1A1TA0A576 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV9S1A1TA0A576 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV9S1A1TA0A576 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV9S1A1TA0A576 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.61■□□□□ 0.41
TCRBV9S1A1TA0A576 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TCRBV9S1A1TA0A576 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.61■□□□□ 0.41
TCRBV9S1A1TA0A576 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.61■□□□□ 0.41
TCRBV9S1A1TA0A576 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
TCRBV9S1A1TA0A576 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.61■□□□□ 0.41
TCRBV9S1A1TA0A576 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.61■□□□□ 0.41
TCRBV9S1A1TA0A576 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.61■□□□□ 0.41
TCRBV9S1A1TA0A576 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.61■□□□□ 0.41
TCRBV9S1A1TA0A576 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.61■□□□□ 0.41
TCRBV9S1A1TA0A576 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
TCRBV9S1A1TA0A576 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.61■□□□□ 0.41
TCRBV9S1A1TA0A576 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
TCRBV9S1A1TA0A576 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV9S1A1TA0A576 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV9S1A1TA0A576 AC073508.3-201ENST00000619697 1419 ntBASIC17.61■□□□□ 0.41
TCRBV9S1A1TA0A576 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
TCRBV9S1A1TA0A576 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TCRBV9S1A1TA0A576 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV9S1A1TA0A576 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV9S1A1TA0A576 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.61■□□□□ 0.41
TCRBV9S1A1TA0A576 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TCRBV9S1A1TA0A576 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV9S1A1TA0A576 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.61■□□□□ 0.41
TCRBV9S1A1TA0A576 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.61■□□□□ 0.41
TCRBV9S1A1TA0A576 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV9S1A1TA0A576 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV9S1A1TA0A576 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.6■□□□□ 0.41
TCRBV9S1A1TA0A576 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
TCRBV9S1A1TA0A576 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.6■□□□□ 0.41
TCRBV9S1A1TA0A576 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV9S1A1TA0A576 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.6■□□□□ 0.41
TCRBV9S1A1TA0A576 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV9S1A1TA0A576 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
TCRBV9S1A1TA0A576 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV9S1A1TA0A576 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms