Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC28.04■■■□□ 2.08
PTCH2Q9Y6C5 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PTCH2Q9Y6C5 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC28.04■■■□□ 2.08
PTCH2Q9Y6C5 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PTCH2Q9Y6C5 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC28.03■■■□□ 2.08
PTCH2Q9Y6C5 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
PTCH2Q9Y6C5 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC28.03■■■□□ 2.08
PTCH2Q9Y6C5 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
PTCH2Q9Y6C5 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
PTCH2Q9Y6C5 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
PTCH2Q9Y6C5 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
PTCH2Q9Y6C5 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC28.02■■■□□ 2.08
PTCH2Q9Y6C5 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.08
PTCH2Q9Y6C5 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
PTCH2Q9Y6C5 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
PTCH2Q9Y6C5 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
PTCH2Q9Y6C5 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC28.01■■■□□ 2.07
PTCH2Q9Y6C5 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC28.01■■■□□ 2.07
PTCH2Q9Y6C5 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC28.01■■■□□ 2.07
PTCH2Q9Y6C5 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC28.01■■■□□ 2.07
PTCH2Q9Y6C5 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC28■■■□□ 2.07
PTCH2Q9Y6C5 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC28■■■□□ 2.07
PTCH2Q9Y6C5 RPS2P7-201ENST00000447334 885 ntBASIC28■■■□□ 2.07
PTCH2Q9Y6C5 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
PTCH2Q9Y6C5 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC28■■■□□ 2.07
PTCH2Q9Y6C5 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC28■■■□□ 2.07
PTCH2Q9Y6C5 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
PTCH2Q9Y6C5 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC27.99■■■□□ 2.07
PTCH2Q9Y6C5 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
PTCH2Q9Y6C5 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
PTCH2Q9Y6C5 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC27.98■■■□□ 2.07
PTCH2Q9Y6C5 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC27.98■■■□□ 2.07
PTCH2Q9Y6C5 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
PTCH2Q9Y6C5 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC27.98■■■□□ 2.07
PTCH2Q9Y6C5 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC27.98■■■□□ 2.07
PTCH2Q9Y6C5 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
PTCH2Q9Y6C5 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC27.98■■■□□ 2.07
PTCH2Q9Y6C5 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC27.98■■■□□ 2.07
PTCH2Q9Y6C5 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
PTCH2Q9Y6C5 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
PTCH2Q9Y6C5 TRIR-202ENST00000588213 841 ntTSL 3 BASIC27.97■■■□□ 2.07
PTCH2Q9Y6C5 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC27.97■■■□□ 2.07
PTCH2Q9Y6C5 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
PTCH2Q9Y6C5 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC27.96■■■□□ 2.07
PTCH2Q9Y6C5 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
PTCH2Q9Y6C5 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC27.95■■■□□ 2.07
PTCH2Q9Y6C5 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
PTCH2Q9Y6C5 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC27.95■■■□□ 2.06
PTCH2Q9Y6C5 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
PTCH2Q9Y6C5 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC27.95■■■□□ 2.06
PTCH2Q9Y6C5 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC27.95■■■□□ 2.06
PTCH2Q9Y6C5 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC27.95■■■□□ 2.06
PTCH2Q9Y6C5 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
PTCH2Q9Y6C5 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
PTCH2Q9Y6C5 TSPY9P-201ENST00000440215 945 ntBASIC27.94■■■□□ 2.06
PTCH2Q9Y6C5 TSPY11P-201ENST00000442607 1045 ntBASIC27.94■■■□□ 2.06
PTCH2Q9Y6C5 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC27.94■■■□□ 2.06
PTCH2Q9Y6C5 AC131281.2-201ENST00000520478 145 ntBASIC27.94■■■□□ 2.06
PTCH2Q9Y6C5 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC27.94■■■□□ 2.06
PTCH2Q9Y6C5 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
PTCH2Q9Y6C5 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC27.93■■■□□ 2.06
PTCH2Q9Y6C5 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
PTCH2Q9Y6C5 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC27.92■■■□□ 2.06
PTCH2Q9Y6C5 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC27.92■■■□□ 2.06
PTCH2Q9Y6C5 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC27.92■■■□□ 2.06
PTCH2Q9Y6C5 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
PTCH2Q9Y6C5 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
PTCH2Q9Y6C5 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
PTCH2Q9Y6C5 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
PTCH2Q9Y6C5 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
PTCH2Q9Y6C5 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC27.91■■■□□ 2.06
PTCH2Q9Y6C5 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC27.9■■■□□ 2.06
PTCH2Q9Y6C5 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC27.9■■■□□ 2.06
PTCH2Q9Y6C5 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC27.9■■■□□ 2.06
PTCH2Q9Y6C5 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
PTCH2Q9Y6C5 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
PTCH2Q9Y6C5 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC27.9■■■□□ 2.06
PTCH2Q9Y6C5 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC27.89■■■□□ 2.06
PTCH2Q9Y6C5 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
PTCH2Q9Y6C5 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
PTCH2Q9Y6C5 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
PTCH2Q9Y6C5 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC27.89■■■□□ 2.05
PTCH2Q9Y6C5 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC27.88■■■□□ 2.05
PTCH2Q9Y6C5 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC27.87■■■□□ 2.05
PTCH2Q9Y6C5 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC27.87■■■□□ 2.05
PTCH2Q9Y6C5 AL136116.3-201ENST00000402907 1138 ntBASIC27.87■■■□□ 2.05
PTCH2Q9Y6C5 RPP21-222ENST00000433076 577 ntTSL 2 BASIC27.87■■■□□ 2.05
PTCH2Q9Y6C5 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC27.87■■■□□ 2.05
PTCH2Q9Y6C5 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC27.87■■■□□ 2.05
PTCH2Q9Y6C5 AC110285.6-201ENST00000617652 491 ntBASIC27.87■■■□□ 2.05
PTCH2Q9Y6C5 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
PTCH2Q9Y6C5 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
PTCH2Q9Y6C5 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
PTCH2Q9Y6C5 SRR-208ENST00000576848 588 ntTSL 4 BASIC27.86■■■□□ 2.05
PTCH2Q9Y6C5 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
PTCH2Q9Y6C5 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC27.85■■■□□ 2.05
PTCH2Q9Y6C5 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC27.85■■■□□ 2.05
PTCH2Q9Y6C5 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC27.85■■■□□ 2.05
PTCH2Q9Y6C5 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
PTCH2Q9Y6C5 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms