Protein–RNA interactions for Protein: Q9UJ98

STAG3, Cohesin subunit SA-3, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3Q9UJ98 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC35.59■■■■□ 3.29
STAG3Q9UJ98 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC35.59■■■■□ 3.29
STAG3Q9UJ98 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC35.59■■■■□ 3.29
STAG3Q9UJ98 GRAMD4P7-201ENST00000578182 1232 ntBASIC35.59■■■■□ 3.29
STAG3Q9UJ98 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
STAG3Q9UJ98 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
STAG3Q9UJ98 CREM-229ENST00000474362 1030 ntTSL 2 BASIC35.58■■■■□ 3.29
STAG3Q9UJ98 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
STAG3Q9UJ98 MIR935-201ENST00000401179 91 ntBASIC35.57■■■■□ 3.28
STAG3Q9UJ98 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC35.57■■■■□ 3.28
STAG3Q9UJ98 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.28
STAG3Q9UJ98 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC35.56■■■■□ 3.28
STAG3Q9UJ98 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC35.56■■■■□ 3.28
STAG3Q9UJ98 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC35.56■■■■□ 3.28
STAG3Q9UJ98 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC35.56■■■■□ 3.28
STAG3Q9UJ98 WHAMMP3-201ENST00000611636 1609 ntBASIC35.55■■■■□ 3.28
STAG3Q9UJ98 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
STAG3Q9UJ98 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
STAG3Q9UJ98 RPS2P7-201ENST00000447334 885 ntBASIC35.54■■■■□ 3.28
STAG3Q9UJ98 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC35.54■■■■□ 3.28
STAG3Q9UJ98 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC35.54■■■■□ 3.28
STAG3Q9UJ98 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
STAG3Q9UJ98 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC35.53■■■■□ 3.28
STAG3Q9UJ98 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC35.52■■■■□ 3.28
STAG3Q9UJ98 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
STAG3Q9UJ98 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC35.52■■■■□ 3.28
STAG3Q9UJ98 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC35.52■■■■□ 3.28
STAG3Q9UJ98 LONRF2P2-201ENST00000439212 571 ntBASIC35.52■■■■□ 3.28
STAG3Q9UJ98 LSM7-203ENST00000585409 512 ntTSL 2 BASIC35.52■■■■□ 3.28
STAG3Q9UJ98 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC35.52■■■■□ 3.28
STAG3Q9UJ98 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
STAG3Q9UJ98 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC35.51■■■■□ 3.28
STAG3Q9UJ98 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.27
STAG3Q9UJ98 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC35.51■■■■□ 3.27
STAG3Q9UJ98 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC35.5■■■■□ 3.27
STAG3Q9UJ98 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
STAG3Q9UJ98 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC35.5■■■■□ 3.27
STAG3Q9UJ98 KRT125P-201ENST00000546827 989 ntBASIC35.49■■■■□ 3.27
STAG3Q9UJ98 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
STAG3Q9UJ98 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC35.48■■■■□ 3.27
STAG3Q9UJ98 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC35.48■■■■□ 3.27
STAG3Q9UJ98 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC35.47■■■■□ 3.27
STAG3Q9UJ98 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC35.47■■■■□ 3.27
STAG3Q9UJ98 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
STAG3Q9UJ98 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC35.46■■■■□ 3.27
STAG3Q9UJ98 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC35.46■■■■□ 3.27
STAG3Q9UJ98 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
STAG3Q9UJ98 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC35.46■■■■□ 3.27
STAG3Q9UJ98 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC35.45■■■■□ 3.27
STAG3Q9UJ98 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
STAG3Q9UJ98 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC35.45■■■■□ 3.27
STAG3Q9UJ98 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC35.45■■■■□ 3.27
STAG3Q9UJ98 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
STAG3Q9UJ98 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC35.45■■■■□ 3.27
STAG3Q9UJ98 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC35.44■■■■□ 3.26
STAG3Q9UJ98 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC35.44■■■■□ 3.26
STAG3Q9UJ98 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC35.44■■■■□ 3.26
STAG3Q9UJ98 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC35.44■■■■□ 3.26
STAG3Q9UJ98 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC35.44■■■■□ 3.26
STAG3Q9UJ98 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC35.44■■■■□ 3.26
STAG3Q9UJ98 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
STAG3Q9UJ98 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC35.44■■■■□ 3.26
STAG3Q9UJ98 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC35.44■■■■□ 3.26
STAG3Q9UJ98 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC35.44■■■■□ 3.26
STAG3Q9UJ98 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC35.44■■■■□ 3.26
STAG3Q9UJ98 MIR4787-201ENST00000607364 84 ntBASIC35.44■■■■□ 3.26
STAG3Q9UJ98 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC35.43■■■■□ 3.26
STAG3Q9UJ98 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC35.42■■■■□ 3.26
STAG3Q9UJ98 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
STAG3Q9UJ98 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC35.42■■■■□ 3.26
STAG3Q9UJ98 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC35.42■■■■□ 3.26
STAG3Q9UJ98 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
STAG3Q9UJ98 PEMT-206ENST00000435340 960 ntTSL 5 BASIC35.41■■■■□ 3.26
STAG3Q9UJ98 BX664725.1-201ENST00000438252 379 ntBASIC35.41■■■■□ 3.26
STAG3Q9UJ98 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC35.41■■■■□ 3.26
STAG3Q9UJ98 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC35.4■■■■□ 3.26
STAG3Q9UJ98 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
STAG3Q9UJ98 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
STAG3Q9UJ98 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC35.39■■■■□ 3.26
STAG3Q9UJ98 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC35.39■■■■□ 3.26
STAG3Q9UJ98 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC35.38■■■■□ 3.25
STAG3Q9UJ98 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC35.38■■■■□ 3.25
STAG3Q9UJ98 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
STAG3Q9UJ98 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
STAG3Q9UJ98 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC35.37■■■■□ 3.25
STAG3Q9UJ98 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
STAG3Q9UJ98 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
STAG3Q9UJ98 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC35.35■■■■□ 3.25
STAG3Q9UJ98 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC35.35■■■■□ 3.25
STAG3Q9UJ98 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC35.35■■■■□ 3.25
STAG3Q9UJ98 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
STAG3Q9UJ98 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC35.34■■■■□ 3.25
STAG3Q9UJ98 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC35.34■■■■□ 3.25
STAG3Q9UJ98 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC35.34■■■■□ 3.25
STAG3Q9UJ98 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC35.33■■■■□ 3.25
STAG3Q9UJ98 UNC93B8-201ENST00000511903 705 ntBASIC35.33■■■■□ 3.25
STAG3Q9UJ98 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
STAG3Q9UJ98 KRT16P3-201ENST00000439127 1283 ntBASIC35.32■■■■□ 3.24
STAG3Q9UJ98 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC35.32■■■■□ 3.24
STAG3Q9UJ98 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC35.32■■■■□ 3.24
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms