Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PARPBPQ9NWS1 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
PARPBPQ9NWS1 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PARPBPQ9NWS1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PARPBPQ9NWS1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PARPBPQ9NWS1 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PARPBPQ9NWS1 AL121749.1-202ENST00000609313 2153 ntBASIC21.67■■□□□ 1.06
PARPBPQ9NWS1 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.66■■□□□ 1.06
PARPBPQ9NWS1 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.66■■□□□ 1.06
PARPBPQ9NWS1 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
PARPBPQ9NWS1 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
PARPBPQ9NWS1 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PARPBPQ9NWS1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.66■■□□□ 1.06
PARPBPQ9NWS1 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PARPBPQ9NWS1 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
PARPBPQ9NWS1 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.65■■□□□ 1.06
PARPBPQ9NWS1 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
PARPBPQ9NWS1 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PARPBPQ9NWS1 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.65■■□□□ 1.06
PARPBPQ9NWS1 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
PARPBPQ9NWS1 ABHD17AP5-201ENST00000580133 923 ntBASIC21.65■■□□□ 1.06
PARPBPQ9NWS1 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
PARPBPQ9NWS1 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
PARPBPQ9NWS1 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.65■■□□□ 1.06
PARPBPQ9NWS1 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
PARPBPQ9NWS1 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.64■■□□□ 1.05
PARPBPQ9NWS1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PARPBPQ9NWS1 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.64■■□□□ 1.05
PARPBPQ9NWS1 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.64■■□□□ 1.05
PARPBPQ9NWS1 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PARPBPQ9NWS1 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PARPBPQ9NWS1 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
PARPBPQ9NWS1 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PARPBPQ9NWS1 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PARPBPQ9NWS1 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PARPBPQ9NWS1 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.62■■□□□ 1.05
PARPBPQ9NWS1 AC093536.1-201ENST00000569153 554 ntBASIC21.62■■□□□ 1.05
PARPBPQ9NWS1 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PARPBPQ9NWS1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
PARPBPQ9NWS1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.61■■□□□ 1.05
PARPBPQ9NWS1 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PARPBPQ9NWS1 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PARPBPQ9NWS1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.61■■□□□ 1.05
PARPBPQ9NWS1 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PARPBPQ9NWS1 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.61■■□□□ 1.05
PARPBPQ9NWS1 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
PARPBPQ9NWS1 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PARPBPQ9NWS1 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PARPBPQ9NWS1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
PARPBPQ9NWS1 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PARPBPQ9NWS1 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PARPBPQ9NWS1 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PARPBPQ9NWS1 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
PARPBPQ9NWS1 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PARPBPQ9NWS1 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PARPBPQ9NWS1 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
PARPBPQ9NWS1 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
PARPBPQ9NWS1 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
PARPBPQ9NWS1 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PARPBPQ9NWS1 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PARPBPQ9NWS1 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.59■■□□□ 1.05
PARPBPQ9NWS1 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PARPBPQ9NWS1 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.59■■□□□ 1.05
PARPBPQ9NWS1 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PARPBPQ9NWS1 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PARPBPQ9NWS1 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PARPBPQ9NWS1 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.59■■□□□ 1.05
PARPBPQ9NWS1 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PARPBPQ9NWS1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
PARPBPQ9NWS1 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PARPBPQ9NWS1 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.58■■□□□ 1.05
PARPBPQ9NWS1 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
PARPBPQ9NWS1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.58■■□□□ 1.05
PARPBPQ9NWS1 AC026202.3-201ENST00000600805 1127 ntBASIC21.58■■□□□ 1.05
PARPBPQ9NWS1 AC133552.2-201ENST00000619106 1032 ntBASIC21.58■■□□□ 1.05
PARPBPQ9NWS1 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PARPBPQ9NWS1 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PARPBPQ9NWS1 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
PARPBPQ9NWS1 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
PARPBPQ9NWS1 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PARPBPQ9NWS1 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
PARPBPQ9NWS1 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.57■■□□□ 1.04
PARPBPQ9NWS1 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PARPBPQ9NWS1 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.56■■□□□ 1.04
PARPBPQ9NWS1 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PARPBPQ9NWS1 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PARPBPQ9NWS1 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PARPBPQ9NWS1 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.56■■□□□ 1.04
PARPBPQ9NWS1 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PARPBPQ9NWS1 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PARPBPQ9NWS1 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PARPBPQ9NWS1 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PARPBPQ9NWS1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PARPBPQ9NWS1 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PARPBPQ9NWS1 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.55■■□□□ 1.04
PARPBPQ9NWS1 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
PARPBPQ9NWS1 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
PARPBPQ9NWS1 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.55■■□□□ 1.04
PARPBPQ9NWS1 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PARPBPQ9NWS1 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms