Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMCO4Q9NRQ5 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
SMCO4Q9NRQ5 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMCO4Q9NRQ5 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMCO4Q9NRQ5 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMCO4Q9NRQ5 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMCO4Q9NRQ5 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMCO4Q9NRQ5 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMCO4Q9NRQ5 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMCO4Q9NRQ5 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SMCO4Q9NRQ5 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMCO4Q9NRQ5 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMCO4Q9NRQ5 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMCO4Q9NRQ5 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMCO4Q9NRQ5 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.17■□□□□ 0.66
SMCO4Q9NRQ5 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMCO4Q9NRQ5 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMCO4Q9NRQ5 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMCO4Q9NRQ5 AC138932.3-201ENST00000567634 1902 ntBASIC19.17■□□□□ 0.66
SMCO4Q9NRQ5 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMCO4Q9NRQ5 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMCO4Q9NRQ5 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMCO4Q9NRQ5 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.16■□□□□ 0.66
SMCO4Q9NRQ5 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.16■□□□□ 0.66
SMCO4Q9NRQ5 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMCO4Q9NRQ5 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.15■□□□□ 0.66
SMCO4Q9NRQ5 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMCO4Q9NRQ5 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.15■□□□□ 0.66
SMCO4Q9NRQ5 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SMCO4Q9NRQ5 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SMCO4Q9NRQ5 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
SMCO4Q9NRQ5 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMCO4Q9NRQ5 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMCO4Q9NRQ5 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
SMCO4Q9NRQ5 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMCO4Q9NRQ5 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMCO4Q9NRQ5 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMCO4Q9NRQ5 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.14■□□□□ 0.65
SMCO4Q9NRQ5 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SMCO4Q9NRQ5 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SMCO4Q9NRQ5 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMCO4Q9NRQ5 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMCO4Q9NRQ5 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.13■□□□□ 0.65
SMCO4Q9NRQ5 PKD1P6-201ENST00000343738 4769 ntBASIC19.13■□□□□ 0.65
SMCO4Q9NRQ5 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC19.13■□□□□ 0.65
SMCO4Q9NRQ5 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMCO4Q9NRQ5 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.13■□□□□ 0.65
SMCO4Q9NRQ5 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SMCO4Q9NRQ5 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMCO4Q9NRQ5 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMCO4Q9NRQ5 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMCO4Q9NRQ5 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SMCO4Q9NRQ5 AC010864.1-201ENST00000609407 1511 ntBASIC19.12■□□□□ 0.65
SMCO4Q9NRQ5 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.12■□□□□ 0.65
SMCO4Q9NRQ5 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMCO4Q9NRQ5 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMCO4Q9NRQ5 DUSP8P5-201ENST00000422884 1815 ntBASIC19.11■□□□□ 0.65
SMCO4Q9NRQ5 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SMCO4Q9NRQ5 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
SMCO4Q9NRQ5 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SMCO4Q9NRQ5 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMCO4Q9NRQ5 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMCO4Q9NRQ5 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SMCO4Q9NRQ5 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.11■□□□□ 0.65
SMCO4Q9NRQ5 AC097639.1-201ENST00000565519 1891 ntBASIC19.11■□□□□ 0.65
SMCO4Q9NRQ5 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMCO4Q9NRQ5 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SMCO4Q9NRQ5 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SMCO4Q9NRQ5 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMCO4Q9NRQ5 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMCO4Q9NRQ5 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMCO4Q9NRQ5 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SMCO4Q9NRQ5 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SMCO4Q9NRQ5 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMCO4Q9NRQ5 AC022211.4-201ENST00000625094 2161 ntBASIC19.09■□□□□ 0.65
SMCO4Q9NRQ5 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SMCO4Q9NRQ5 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMCO4Q9NRQ5 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMCO4Q9NRQ5 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.09■□□□□ 0.65
SMCO4Q9NRQ5 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMCO4Q9NRQ5 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SMCO4Q9NRQ5 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMCO4Q9NRQ5 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SMCO4Q9NRQ5 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
SMCO4Q9NRQ5 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.08■□□□□ 0.65
SMCO4Q9NRQ5 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC19.08■□□□□ 0.65
SMCO4Q9NRQ5 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMCO4Q9NRQ5 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
SMCO4Q9NRQ5 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.08■□□□□ 0.64
SMCO4Q9NRQ5 WHAMMP3-201ENST00000611636 1609 ntBASIC19.07■□□□□ 0.64
SMCO4Q9NRQ5 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMCO4Q9NRQ5 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.07■□□□□ 0.64
SMCO4Q9NRQ5 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SMCO4Q9NRQ5 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SMCO4Q9NRQ5 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMCO4Q9NRQ5 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.07■□□□□ 0.64
SMCO4Q9NRQ5 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMCO4Q9NRQ5 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMCO4Q9NRQ5 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.06■□□□□ 0.64
SMCO4Q9NRQ5 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms