Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDH18Q9HCL0 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDH18Q9HCL0 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDH18Q9HCL0 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PCDH18Q9HCL0 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDH18Q9HCL0 DUSP8P4-201ENST00000399538 1761 ntBASIC25.3■■□□□ 1.64
PCDH18Q9HCL0 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PCDH18Q9HCL0 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.29■■□□□ 1.64
PCDH18Q9HCL0 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.28■■□□□ 1.64
PCDH18Q9HCL0 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
PCDH18Q9HCL0 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDH18Q9HCL0 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC25.28■■□□□ 1.64
PCDH18Q9HCL0 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PCDH18Q9HCL0 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDH18Q9HCL0 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.28■■□□□ 1.64
PCDH18Q9HCL0 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PCDH18Q9HCL0 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDH18Q9HCL0 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PCDH18Q9HCL0 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.27■■□□□ 1.64
PCDH18Q9HCL0 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDH18Q9HCL0 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDH18Q9HCL0 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDH18Q9HCL0 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDH18Q9HCL0 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.26■■□□□ 1.63
PCDH18Q9HCL0 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PCDH18Q9HCL0 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PCDH18Q9HCL0 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PCDH18Q9HCL0 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.25■■□□□ 1.63
PCDH18Q9HCL0 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC25.25■■□□□ 1.63
PCDH18Q9HCL0 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
PCDH18Q9HCL0 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
PCDH18Q9HCL0 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PCDH18Q9HCL0 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PCDH18Q9HCL0 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PCDH18Q9HCL0 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PCDH18Q9HCL0 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PCDH18Q9HCL0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
PCDH18Q9HCL0 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDH18Q9HCL0 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDH18Q9HCL0 AC092296.2-201ENST00000589470 999 ntBASIC25.23■■□□□ 1.63
PCDH18Q9HCL0 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PCDH18Q9HCL0 ERN1-208ENST00000606895 2068 ntBASIC25.22■■□□□ 1.63
PCDH18Q9HCL0 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDH18Q9HCL0 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDH18Q9HCL0 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.22■■□□□ 1.63
PCDH18Q9HCL0 AC022413.1-201ENST00000624602 984 ntBASIC25.22■■□□□ 1.63
PCDH18Q9HCL0 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDH18Q9HCL0 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
PCDH18Q9HCL0 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.22■■□□□ 1.63
PCDH18Q9HCL0 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDH18Q9HCL0 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDH18Q9HCL0 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDH18Q9HCL0 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDH18Q9HCL0 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.21■■□□□ 1.63
PCDH18Q9HCL0 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC25.21■■□□□ 1.63
PCDH18Q9HCL0 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
PCDH18Q9HCL0 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
PCDH18Q9HCL0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
PCDH18Q9HCL0 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
PCDH18Q9HCL0 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PCDH18Q9HCL0 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.19■■□□□ 1.62
PCDH18Q9HCL0 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PCDH18Q9HCL0 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PCDH18Q9HCL0 AC025884.2-201ENST00000553429 711 ntBASIC25.19■■□□□ 1.62
PCDH18Q9HCL0 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.18■■□□□ 1.62
PCDH18Q9HCL0 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDH18Q9HCL0 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.18■■□□□ 1.62
PCDH18Q9HCL0 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.18■■□□□ 1.62
PCDH18Q9HCL0 CEP120-209ENST00000515110 606 ntTSL 3 BASIC25.18■■□□□ 1.62
PCDH18Q9HCL0 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.18■■□□□ 1.62
PCDH18Q9HCL0 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PCDH18Q9HCL0 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
PCDH18Q9HCL0 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
PCDH18Q9HCL0 AC010501.1-201ENST00000606270 1962 ntBASIC25.17■■□□□ 1.62
PCDH18Q9HCL0 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDH18Q9HCL0 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.17■■□□□ 1.62
PCDH18Q9HCL0 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDH18Q9HCL0 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
PCDH18Q9HCL0 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDH18Q9HCL0 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.16■■□□□ 1.62
PCDH18Q9HCL0 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.16■■□□□ 1.62
PCDH18Q9HCL0 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
PCDH18Q9HCL0 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDH18Q9HCL0 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDH18Q9HCL0 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
PCDH18Q9HCL0 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PCDH18Q9HCL0 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.16■■□□□ 1.62
PCDH18Q9HCL0 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDH18Q9HCL0 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PCDH18Q9HCL0 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDH18Q9HCL0 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25.15■■□□□ 1.62
PCDH18Q9HCL0 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.15■■□□□ 1.62
PCDH18Q9HCL0 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDH18Q9HCL0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
PCDH18Q9HCL0 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.14■■□□□ 1.62
PCDH18Q9HCL0 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
PCDH18Q9HCL0 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.14■■□□□ 1.62
PCDH18Q9HCL0 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC25.14■■□□□ 1.61
PCDH18Q9HCL0 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDH18Q9HCL0 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms