Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MSL2Q9HCI7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
MSL2Q9HCI7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.86■□□□□ 0.93
MSL2Q9HCI7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
MSL2Q9HCI7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MSL2Q9HCI7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
MSL2Q9HCI7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.86■□□□□ 0.93
MSL2Q9HCI7 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
MSL2Q9HCI7 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.85■□□□□ 0.93
MSL2Q9HCI7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.85■□□□□ 0.93
MSL2Q9HCI7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.85■□□□□ 0.93
MSL2Q9HCI7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.85■□□□□ 0.93
MSL2Q9HCI7 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
MSL2Q9HCI7 ABHD17AP5-201ENST00000580133 923 ntBASIC20.85■□□□□ 0.93
MSL2Q9HCI7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.85■□□□□ 0.93
MSL2Q9HCI7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MSL2Q9HCI7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
MSL2Q9HCI7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MSL2Q9HCI7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MSL2Q9HCI7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.84■□□□□ 0.93
MSL2Q9HCI7 RP9P-202ENST00000450133 1212 ntBASIC20.84■□□□□ 0.93
MSL2Q9HCI7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MSL2Q9HCI7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
MSL2Q9HCI7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
MSL2Q9HCI7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.83■□□□□ 0.93
MSL2Q9HCI7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MSL2Q9HCI7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MSL2Q9HCI7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
MSL2Q9HCI7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
MSL2Q9HCI7 AC093536.1-201ENST00000569153 554 ntBASIC20.83■□□□□ 0.93
MSL2Q9HCI7 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
MSL2Q9HCI7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
MSL2Q9HCI7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
MSL2Q9HCI7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MSL2Q9HCI7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MSL2Q9HCI7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MSL2Q9HCI7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MSL2Q9HCI7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MSL2Q9HCI7 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MSL2Q9HCI7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
MSL2Q9HCI7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.81■□□□□ 0.92
MSL2Q9HCI7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
MSL2Q9HCI7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
MSL2Q9HCI7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MSL2Q9HCI7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MSL2Q9HCI7 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
MSL2Q9HCI7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MSL2Q9HCI7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MSL2Q9HCI7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.8■□□□□ 0.92
MSL2Q9HCI7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MSL2Q9HCI7 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MSL2Q9HCI7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MSL2Q9HCI7 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
MSL2Q9HCI7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.79■□□□□ 0.92
MSL2Q9HCI7 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
MSL2Q9HCI7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.79■□□□□ 0.92
MSL2Q9HCI7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
MSL2Q9HCI7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MSL2Q9HCI7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
MSL2Q9HCI7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MSL2Q9HCI7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MSL2Q9HCI7 U85056.1-201ENST00000616429 682 ntBASIC20.78■□□□□ 0.92
MSL2Q9HCI7 AC133552.2-201ENST00000619106 1032 ntBASIC20.78■□□□□ 0.92
MSL2Q9HCI7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MSL2Q9HCI7 AC135731.1-201ENST00000569415 2548 ntBASIC20.77■□□□□ 0.92
MSL2Q9HCI7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MSL2Q9HCI7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MSL2Q9HCI7 AC009831.1-201ENST00000580420 1582 ntBASIC20.77■□□□□ 0.92
MSL2Q9HCI7 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
MSL2Q9HCI7 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.77■□□□□ 0.92
MSL2Q9HCI7 AC026202.3-201ENST00000600805 1127 ntBASIC20.77■□□□□ 0.92
MSL2Q9HCI7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MSL2Q9HCI7 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
MSL2Q9HCI7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.91
MSL2Q9HCI7 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.91
MSL2Q9HCI7 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
MSL2Q9HCI7 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
MSL2Q9HCI7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MSL2Q9HCI7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MSL2Q9HCI7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
MSL2Q9HCI7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.76■□□□□ 0.91
MSL2Q9HCI7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
MSL2Q9HCI7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MSL2Q9HCI7 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MSL2Q9HCI7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MSL2Q9HCI7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MSL2Q9HCI7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MSL2Q9HCI7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MSL2Q9HCI7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.75■□□□□ 0.91
MSL2Q9HCI7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MSL2Q9HCI7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
MSL2Q9HCI7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.75■□□□□ 0.91
MSL2Q9HCI7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MSL2Q9HCI7 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MSL2Q9HCI7 NTF6A-201ENST00000591175 560 ntBASIC20.73■□□□□ 0.91
MSL2Q9HCI7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.73■□□□□ 0.91
MSL2Q9HCI7 RAP2CP1-202ENST00000605179 643 ntBASIC20.73■□□□□ 0.91
MSL2Q9HCI7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MSL2Q9HCI7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.72■□□□□ 0.91
MSL2Q9HCI7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms