Protein–RNA interactions for Protein: Q9HBM1

SPC25, Kinetochore protein Spc25, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25Q9HBM1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC27.47■■□□□ 1.99
SPC25Q9HBM1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
SPC25Q9HBM1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
SPC25Q9HBM1 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
SPC25Q9HBM1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC27.46■■□□□ 1.99
SPC25Q9HBM1 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
SPC25Q9HBM1 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC27.45■■□□□ 1.99
SPC25Q9HBM1 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.99
SPC25Q9HBM1 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
SPC25Q9HBM1 RNF146-205ENST00000477776 762 ntTSL 3 BASIC27.45■■□□□ 1.98
SPC25Q9HBM1 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SPC25Q9HBM1 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC27.44■■□□□ 1.98
SPC25Q9HBM1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
SPC25Q9HBM1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC27.44■■□□□ 1.98
SPC25Q9HBM1 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC27.44■■□□□ 1.98
SPC25Q9HBM1 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
SPC25Q9HBM1 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SPC25Q9HBM1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC27.43■■□□□ 1.98
SPC25Q9HBM1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC27.43■■□□□ 1.98
SPC25Q9HBM1 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC27.42■■□□□ 1.98
SPC25Q9HBM1 AL356441.2-201ENST00000443009 864 ntBASIC27.42■■□□□ 1.98
SPC25Q9HBM1 RPS2P7-201ENST00000447334 885 ntBASIC27.42■■□□□ 1.98
SPC25Q9HBM1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC27.42■■□□□ 1.98
SPC25Q9HBM1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC27.42■■□□□ 1.98
SPC25Q9HBM1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
SPC25Q9HBM1 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
SPC25Q9HBM1 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC27.41■■□□□ 1.98
SPC25Q9HBM1 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC27.4■■□□□ 1.98
SPC25Q9HBM1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC27.4■■□□□ 1.98
SPC25Q9HBM1 AC239859.2-201ENST00000444165 318 ntBASIC27.4■■□□□ 1.98
SPC25Q9HBM1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC27.4■■□□□ 1.98
SPC25Q9HBM1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SPC25Q9HBM1 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC27.4■■□□□ 1.98
SPC25Q9HBM1 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SPC25Q9HBM1 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC27.4■■□□□ 1.98
SPC25Q9HBM1 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SPC25Q9HBM1 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SPC25Q9HBM1 AC019069.1-201ENST00000610008 1333 ntBASIC27.4■■□□□ 1.98
SPC25Q9HBM1 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SPC25Q9HBM1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC27.39■■□□□ 1.98
SPC25Q9HBM1 PROC-203ENST00000409048 1586 ntTSL 5 BASIC27.39■■□□□ 1.98
SPC25Q9HBM1 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC27.39■■□□□ 1.98
SPC25Q9HBM1 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
SPC25Q9HBM1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC27.39■■□□□ 1.98
SPC25Q9HBM1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC27.39■■□□□ 1.98
SPC25Q9HBM1 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
SPC25Q9HBM1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC27.39■■□□□ 1.97
SPC25Q9HBM1 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC27.38■■□□□ 1.97
SPC25Q9HBM1 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
SPC25Q9HBM1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC27.38■■□□□ 1.97
SPC25Q9HBM1 LONRF2P2-201ENST00000439212 571 ntBASIC27.38■■□□□ 1.97
SPC25Q9HBM1 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
SPC25Q9HBM1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SPC25Q9HBM1 Z92544.1-202ENST00000571933 1220 ntBASIC27.38■■□□□ 1.97
SPC25Q9HBM1 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
SPC25Q9HBM1 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
SPC25Q9HBM1 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC27.37■■□□□ 1.97
SPC25Q9HBM1 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC27.37■■□□□ 1.97
SPC25Q9HBM1 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC27.37■■□□□ 1.97
SPC25Q9HBM1 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC27.36■■□□□ 1.97
SPC25Q9HBM1 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
SPC25Q9HBM1 KRT18P10-201ENST00000388836 1287 ntBASIC27.36■■□□□ 1.97
SPC25Q9HBM1 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC27.36■■□□□ 1.97
SPC25Q9HBM1 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC27.36■■□□□ 1.97
SPC25Q9HBM1 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SPC25Q9HBM1 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
SPC25Q9HBM1 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC27.35■■□□□ 1.97
SPC25Q9HBM1 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
SPC25Q9HBM1 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SPC25Q9HBM1 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SPC25Q9HBM1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
SPC25Q9HBM1 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
SPC25Q9HBM1 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
SPC25Q9HBM1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
SPC25Q9HBM1 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC27.32■■□□□ 1.96
SPC25Q9HBM1 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SPC25Q9HBM1 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SPC25Q9HBM1 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
SPC25Q9HBM1 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SPC25Q9HBM1 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SPC25Q9HBM1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SPC25Q9HBM1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC27.31■■□□□ 1.96
SPC25Q9HBM1 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SPC25Q9HBM1 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC27.31■■□□□ 1.96
SPC25Q9HBM1 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SPC25Q9HBM1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SPC25Q9HBM1 AC022616.5-201ENST00000518796 181 ntBASIC27.29■■□□□ 1.96
SPC25Q9HBM1 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC27.29■■□□□ 1.96
SPC25Q9HBM1 ABCB10P1-201ENST00000614297 2181 ntBASIC27.29■■□□□ 1.96
SPC25Q9HBM1 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SPC25Q9HBM1 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
SPC25Q9HBM1 KRT125P-201ENST00000546827 989 ntBASIC27.28■■□□□ 1.96
SPC25Q9HBM1 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC27.28■■□□□ 1.96
SPC25Q9HBM1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SPC25Q9HBM1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC27.27■■□□□ 1.96
SPC25Q9HBM1 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC27.27■■□□□ 1.96
SPC25Q9HBM1 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC27.26■■□□□ 1.95
SPC25Q9HBM1 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SPC25Q9HBM1 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC27.26■■□□□ 1.95
SPC25Q9HBM1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms