Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
CDK5RAP1Q96SZ6 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CDK5RAP1Q96SZ6 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
CDK5RAP1Q96SZ6 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
CDK5RAP1Q96SZ6 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
CDK5RAP1Q96SZ6 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CDK5RAP1Q96SZ6 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CDK5RAP1Q96SZ6 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CDK5RAP1Q96SZ6 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CDK5RAP1Q96SZ6 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
CDK5RAP1Q96SZ6 AL033527.3-201ENST00000566366 1196 ntBASIC25.4■■□□□ 1.66
CDK5RAP1Q96SZ6 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.39■■□□□ 1.66
CDK5RAP1Q96SZ6 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC25.39■■□□□ 1.66
CDK5RAP1Q96SZ6 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CDK5RAP1Q96SZ6 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CDK5RAP1Q96SZ6 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CDK5RAP1Q96SZ6 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CDK5RAP1Q96SZ6 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
CDK5RAP1Q96SZ6 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
CDK5RAP1Q96SZ6 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC25.38■■□□□ 1.65
CDK5RAP1Q96SZ6 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
CDK5RAP1Q96SZ6 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.37■■□□□ 1.65
CDK5RAP1Q96SZ6 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
CDK5RAP1Q96SZ6 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC25.37■■□□□ 1.65
CDK5RAP1Q96SZ6 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CDK5RAP1Q96SZ6 DUX4L9-201ENST00000449051 1259 ntBASIC25.37■■□□□ 1.65
CDK5RAP1Q96SZ6 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC25.37■■□□□ 1.65
CDK5RAP1Q96SZ6 AC018755.3-202ENST00000596210 929 ntBASIC25.37■■□□□ 1.65
CDK5RAP1Q96SZ6 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
CDK5RAP1Q96SZ6 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CDK5RAP1Q96SZ6 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CDK5RAP1Q96SZ6 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CDK5RAP1Q96SZ6 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC25.35■■□□□ 1.65
CDK5RAP1Q96SZ6 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CDK5RAP1Q96SZ6 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC25.35■■□□□ 1.65
CDK5RAP1Q96SZ6 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
CDK5RAP1Q96SZ6 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
CDK5RAP1Q96SZ6 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CDK5RAP1Q96SZ6 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CDK5RAP1Q96SZ6 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CDK5RAP1Q96SZ6 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CDK5RAP1Q96SZ6 MIR6765-201ENST00000614092 87 ntBASIC25.34■■□□□ 1.65
CDK5RAP1Q96SZ6 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CDK5RAP1Q96SZ6 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
CDK5RAP1Q96SZ6 GUK1-208ENST00000366728 842 ntTSL 2 BASIC25.33■■□□□ 1.65
CDK5RAP1Q96SZ6 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
CDK5RAP1Q96SZ6 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC25.33■■□□□ 1.65
CDK5RAP1Q96SZ6 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
CDK5RAP1Q96SZ6 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
CDK5RAP1Q96SZ6 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.32■■□□□ 1.64
CDK5RAP1Q96SZ6 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
CDK5RAP1Q96SZ6 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
CDK5RAP1Q96SZ6 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CDK5RAP1Q96SZ6 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC25.32■■□□□ 1.64
CDK5RAP1Q96SZ6 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CDK5RAP1Q96SZ6 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC25.31■■□□□ 1.64
CDK5RAP1Q96SZ6 SPCS2P3-201ENST00000500401 656 ntBASIC25.31■■□□□ 1.64
CDK5RAP1Q96SZ6 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CDK5RAP1Q96SZ6 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CDK5RAP1Q96SZ6 DUX4L18-201ENST00000553347 1267 ntBASIC25.3■■□□□ 1.64
CDK5RAP1Q96SZ6 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
CDK5RAP1Q96SZ6 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CDK5RAP1Q96SZ6 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CDK5RAP1Q96SZ6 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CDK5RAP1Q96SZ6 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CDK5RAP1Q96SZ6 KRT18P10-201ENST00000388836 1287 ntBASIC25.29■■□□□ 1.64
CDK5RAP1Q96SZ6 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC25.29■■□□□ 1.64
CDK5RAP1Q96SZ6 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
CDK5RAP1Q96SZ6 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC25.29■■□□□ 1.64
CDK5RAP1Q96SZ6 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC25.29■■□□□ 1.64
CDK5RAP1Q96SZ6 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC25.29■■□□□ 1.64
CDK5RAP1Q96SZ6 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CDK5RAP1Q96SZ6 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CDK5RAP1Q96SZ6 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CDK5RAP1Q96SZ6 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CDK5RAP1Q96SZ6 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC25.29■■□□□ 1.64
CDK5RAP1Q96SZ6 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CDK5RAP1Q96SZ6 HYI-210ENST00000486909 905 ntTSL 5 BASIC25.28■■□□□ 1.64
CDK5RAP1Q96SZ6 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC25.28■■□□□ 1.64
CDK5RAP1Q96SZ6 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.28■■□□□ 1.64
CDK5RAP1Q96SZ6 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.27■■□□□ 1.64
CDK5RAP1Q96SZ6 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
CDK5RAP1Q96SZ6 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
CDK5RAP1Q96SZ6 IDNK-203ENST00000405990 629 ntTSL 2 BASIC25.27■■□□□ 1.64
CDK5RAP1Q96SZ6 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC25.27■■□□□ 1.64
CDK5RAP1Q96SZ6 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC25.27■■□□□ 1.64
CDK5RAP1Q96SZ6 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CDK5RAP1Q96SZ6 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CDK5RAP1Q96SZ6 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CDK5RAP1Q96SZ6 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC25.26■■□□□ 1.63
CDK5RAP1Q96SZ6 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
CDK5RAP1Q96SZ6 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.26■■□□□ 1.63
CDK5RAP1Q96SZ6 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
CDK5RAP1Q96SZ6 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CDK5RAP1Q96SZ6 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CDK5RAP1Q96SZ6 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CDK5RAP1Q96SZ6 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CDK5RAP1Q96SZ6 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC25.25■■□□□ 1.63
CDK5RAP1Q96SZ6 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC25.25■■□□□ 1.63
CDK5RAP1Q96SZ6 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.25■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms