Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
NEK1Q96PY6 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC28.93■■■□□ 2.22
NEK1Q96PY6 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
NEK1Q96PY6 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC28.93■■■□□ 2.22
NEK1Q96PY6 MOB2-207ENST00000614710 705 ntTSL 5 BASIC28.93■■■□□ 2.22
NEK1Q96PY6 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
NEK1Q96PY6 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
NEK1Q96PY6 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
NEK1Q96PY6 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
NEK1Q96PY6 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
NEK1Q96PY6 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC28.92■■■□□ 2.22
NEK1Q96PY6 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC28.91■■■□□ 2.22
NEK1Q96PY6 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC28.91■■■□□ 2.22
NEK1Q96PY6 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
NEK1Q96PY6 AC022413.1-201ENST00000624602 984 ntBASIC28.91■■■□□ 2.22
NEK1Q96PY6 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC28.91■■■□□ 2.22
NEK1Q96PY6 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
NEK1Q96PY6 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
NEK1Q96PY6 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC28.9■■■□□ 2.22
NEK1Q96PY6 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
NEK1Q96PY6 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC28.9■■■□□ 2.22
NEK1Q96PY6 DUSP8P4-201ENST00000399538 1761 ntBASIC28.9■■■□□ 2.22
NEK1Q96PY6 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC28.9■■■□□ 2.22
NEK1Q96PY6 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC28.89■■■□□ 2.22
NEK1Q96PY6 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC28.89■■■□□ 2.22
NEK1Q96PY6 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC28.89■■■□□ 2.22
NEK1Q96PY6 AC092296.2-201ENST00000589470 999 ntBASIC28.89■■■□□ 2.22
NEK1Q96PY6 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
NEK1Q96PY6 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
NEK1Q96PY6 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC28.89■■■□□ 2.22
NEK1Q96PY6 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC28.88■■■□□ 2.21
NEK1Q96PY6 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
NEK1Q96PY6 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC28.88■■■□□ 2.21
NEK1Q96PY6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC28.88■■■□□ 2.21
NEK1Q96PY6 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC28.88■■■□□ 2.21
NEK1Q96PY6 CEP120-209ENST00000515110 606 ntTSL 3 BASIC28.87■■■□□ 2.21
NEK1Q96PY6 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC28.87■■■□□ 2.21
NEK1Q96PY6 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
NEK1Q96PY6 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
NEK1Q96PY6 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC28.85■■■□□ 2.21
NEK1Q96PY6 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
NEK1Q96PY6 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC28.85■■■□□ 2.21
NEK1Q96PY6 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
NEK1Q96PY6 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC28.84■■■□□ 2.21
NEK1Q96PY6 AC025884.2-201ENST00000553429 711 ntBASIC28.84■■■□□ 2.21
NEK1Q96PY6 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC28.84■■■□□ 2.21
NEK1Q96PY6 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
NEK1Q96PY6 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
NEK1Q96PY6 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
NEK1Q96PY6 ERN1-208ENST00000606895 2068 ntBASIC28.83■■■□□ 2.21
NEK1Q96PY6 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC28.83■■■□□ 2.21
NEK1Q96PY6 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
NEK1Q96PY6 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
NEK1Q96PY6 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
NEK1Q96PY6 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
NEK1Q96PY6 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
NEK1Q96PY6 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
NEK1Q96PY6 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC28.81■■■□□ 2.2
NEK1Q96PY6 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC28.81■■■□□ 2.2
NEK1Q96PY6 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC28.81■■■□□ 2.2
NEK1Q96PY6 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
NEK1Q96PY6 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC28.8■■■□□ 2.2
NEK1Q96PY6 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
NEK1Q96PY6 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC28.8■■■□□ 2.2
NEK1Q96PY6 ECEL1P2-201ENST00000461596 1295 ntBASIC28.8■■■□□ 2.2
NEK1Q96PY6 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
NEK1Q96PY6 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
NEK1Q96PY6 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
NEK1Q96PY6 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC28.79■■■□□ 2.2
NEK1Q96PY6 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
NEK1Q96PY6 SMPD5-203ENST00000639008 1464 ntBASIC28.79■■■□□ 2.2
NEK1Q96PY6 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC28.79■■■□□ 2.2
NEK1Q96PY6 PFN2-211ENST00000489155 636 ntTSL 4 BASIC28.79■■■□□ 2.2
NEK1Q96PY6 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
NEK1Q96PY6 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
NEK1Q96PY6 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC28.78■■■□□ 2.2
NEK1Q96PY6 GPX1-201ENST00000419349 1106 ntBASIC28.78■■■□□ 2.2
NEK1Q96PY6 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
NEK1Q96PY6 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC28.78■■■□□ 2.2
NEK1Q96PY6 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
NEK1Q96PY6 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
NEK1Q96PY6 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
NEK1Q96PY6 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC28.77■■■□□ 2.2
NEK1Q96PY6 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC28.77■■■□□ 2.2
NEK1Q96PY6 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
NEK1Q96PY6 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC28.76■■■□□ 2.19
NEK1Q96PY6 AC010501.1-201ENST00000606270 1962 ntBASIC28.76■■■□□ 2.19
NEK1Q96PY6 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC28.76■■■□□ 2.19
NEK1Q96PY6 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
NEK1Q96PY6 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC28.75■■■□□ 2.19
NEK1Q96PY6 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC28.75■■■□□ 2.19
NEK1Q96PY6 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
NEK1Q96PY6 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
NEK1Q96PY6 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
NEK1Q96PY6 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC28.75■■■□□ 2.19
NEK1Q96PY6 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
NEK1Q96PY6 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC28.74■■■□□ 2.19
NEK1Q96PY6 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC28.74■■■□□ 2.19
NEK1Q96PY6 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC28.74■■■□□ 2.19
NEK1Q96PY6 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms