Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NECTIN4Q96NY8 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
NECTIN4Q96NY8 RPS2P7-201ENST00000447334 885 ntBASIC25.62■■□□□ 1.69
NECTIN4Q96NY8 CREM-229ENST00000474362 1030 ntTSL 2 BASIC25.62■■□□□ 1.69
NECTIN4Q96NY8 LSM7-203ENST00000585409 512 ntTSL 2 BASIC25.62■■□□□ 1.69
NECTIN4Q96NY8 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
NECTIN4Q96NY8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NECTIN4Q96NY8 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
NECTIN4Q96NY8 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
NECTIN4Q96NY8 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.61■■□□□ 1.69
NECTIN4Q96NY8 LONRF2P2-201ENST00000439212 571 ntBASIC25.61■■□□□ 1.69
NECTIN4Q96NY8 KRT125P-201ENST00000546827 989 ntBASIC25.61■■□□□ 1.69
NECTIN4Q96NY8 GRAMD4P7-201ENST00000578182 1232 ntBASIC25.61■■□□□ 1.69
NECTIN4Q96NY8 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NECTIN4Q96NY8 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NECTIN4Q96NY8 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
NECTIN4Q96NY8 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
NECTIN4Q96NY8 MIR935-201ENST00000401179 91 ntBASIC25.6■■□□□ 1.69
NECTIN4Q96NY8 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC25.6■■□□□ 1.69
NECTIN4Q96NY8 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
NECTIN4Q96NY8 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
NECTIN4Q96NY8 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
NECTIN4Q96NY8 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
NECTIN4Q96NY8 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
NECTIN4Q96NY8 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
NECTIN4Q96NY8 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
NECTIN4Q96NY8 AL139393.2-201ENST00000608721 2025 ntBASIC25.58■■□□□ 1.69
NECTIN4Q96NY8 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC25.58■■□□□ 1.69
NECTIN4Q96NY8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC25.58■■□□□ 1.69
NECTIN4Q96NY8 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.58■■□□□ 1.69
NECTIN4Q96NY8 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
NECTIN4Q96NY8 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
NECTIN4Q96NY8 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.68
NECTIN4Q96NY8 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
NECTIN4Q96NY8 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
NECTIN4Q96NY8 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.56■■□□□ 1.68
NECTIN4Q96NY8 WHAMMP3-201ENST00000611636 1609 ntBASIC25.56■■□□□ 1.68
NECTIN4Q96NY8 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
NECTIN4Q96NY8 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
NECTIN4Q96NY8 BX664725.1-201ENST00000438252 379 ntBASIC25.56■■□□□ 1.68
NECTIN4Q96NY8 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.56■■□□□ 1.68
NECTIN4Q96NY8 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
NECTIN4Q96NY8 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
NECTIN4Q96NY8 AC022616.5-201ENST00000518796 181 ntBASIC25.55■■□□□ 1.68
NECTIN4Q96NY8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC25.55■■□□□ 1.68
NECTIN4Q96NY8 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
NECTIN4Q96NY8 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
NECTIN4Q96NY8 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
NECTIN4Q96NY8 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC25.54■■□□□ 1.68
NECTIN4Q96NY8 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC25.54■■□□□ 1.68
NECTIN4Q96NY8 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
NECTIN4Q96NY8 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC25.53■■□□□ 1.68
NECTIN4Q96NY8 PEMT-206ENST00000435340 960 ntTSL 5 BASIC25.53■■□□□ 1.68
NECTIN4Q96NY8 MIR4787-201ENST00000607364 84 ntBASIC25.53■■□□□ 1.68
NECTIN4Q96NY8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.53■■□□□ 1.68
NECTIN4Q96NY8 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
NECTIN4Q96NY8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
NECTIN4Q96NY8 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
NECTIN4Q96NY8 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.52■■□□□ 1.68
NECTIN4Q96NY8 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
NECTIN4Q96NY8 KRT18P10-201ENST00000388836 1287 ntBASIC25.52■■□□□ 1.68
NECTIN4Q96NY8 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
NECTIN4Q96NY8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC25.52■■□□□ 1.68
NECTIN4Q96NY8 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
NECTIN4Q96NY8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
NECTIN4Q96NY8 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
NECTIN4Q96NY8 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
NECTIN4Q96NY8 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
NECTIN4Q96NY8 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
NECTIN4Q96NY8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC25.51■■□□□ 1.67
NECTIN4Q96NY8 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
NECTIN4Q96NY8 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
NECTIN4Q96NY8 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
NECTIN4Q96NY8 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
NECTIN4Q96NY8 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
NECTIN4Q96NY8 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
NECTIN4Q96NY8 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
NECTIN4Q96NY8 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC25.49■■□□□ 1.67
NECTIN4Q96NY8 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC25.49■■□□□ 1.67
NECTIN4Q96NY8 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.48■■□□□ 1.67
NECTIN4Q96NY8 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
NECTIN4Q96NY8 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
NECTIN4Q96NY8 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC25.48■■□□□ 1.67
NECTIN4Q96NY8 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
NECTIN4Q96NY8 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
NECTIN4Q96NY8 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
NECTIN4Q96NY8 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC25.47■■□□□ 1.67
NECTIN4Q96NY8 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC25.47■■□□□ 1.67
NECTIN4Q96NY8 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
NECTIN4Q96NY8 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
NECTIN4Q96NY8 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC25.46■■□□□ 1.67
NECTIN4Q96NY8 KRT16P3-201ENST00000439127 1283 ntBASIC25.46■■□□□ 1.67
NECTIN4Q96NY8 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC25.46■■□□□ 1.67
NECTIN4Q96NY8 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
NECTIN4Q96NY8 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
NECTIN4Q96NY8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC25.45■■□□□ 1.66
NECTIN4Q96NY8 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
NECTIN4Q96NY8 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
NECTIN4Q96NY8 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
NECTIN4Q96NY8 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.45■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms