Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SLC47A1Q96FL8 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SLC47A1Q96FL8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SLC47A1Q96FL8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SLC47A1Q96FL8 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
SLC47A1Q96FL8 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SLC47A1Q96FL8 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.8■■□□□ 1.24
SLC47A1Q96FL8 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.8■■□□□ 1.24
SLC47A1Q96FL8 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
SLC47A1Q96FL8 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC22.79■■□□□ 1.24
SLC47A1Q96FL8 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
SLC47A1Q96FL8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC22.79■■□□□ 1.24
SLC47A1Q96FL8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
SLC47A1Q96FL8 LINC01971-201ENST00000617888 1048 ntBASIC22.79■■□□□ 1.24
SLC47A1Q96FL8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.79■■□□□ 1.24
SLC47A1Q96FL8 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.79■■□□□ 1.24
SLC47A1Q96FL8 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
SLC47A1Q96FL8 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.78■■□□□ 1.24
SLC47A1Q96FL8 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.78■■□□□ 1.24
SLC47A1Q96FL8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SLC47A1Q96FL8 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SLC47A1Q96FL8 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
SLC47A1Q96FL8 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
SLC47A1Q96FL8 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SLC47A1Q96FL8 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
SLC47A1Q96FL8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC22.77■■□□□ 1.24
SLC47A1Q96FL8 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
SLC47A1Q96FL8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.77■■□□□ 1.24
SLC47A1Q96FL8 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
SLC47A1Q96FL8 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SLC47A1Q96FL8 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC22.76■■□□□ 1.23
SLC47A1Q96FL8 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.76■■□□□ 1.23
SLC47A1Q96FL8 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
SLC47A1Q96FL8 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
SLC47A1Q96FL8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.75■■□□□ 1.23
SLC47A1Q96FL8 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
SLC47A1Q96FL8 MLEC-202ENST00000412616 841 ntTSL 3 BASIC22.75■■□□□ 1.23
SLC47A1Q96FL8 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
SLC47A1Q96FL8 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SLC47A1Q96FL8 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SLC47A1Q96FL8 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
SLC47A1Q96FL8 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SLC47A1Q96FL8 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
SLC47A1Q96FL8 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SLC47A1Q96FL8 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SLC47A1Q96FL8 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
SLC47A1Q96FL8 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SLC47A1Q96FL8 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
SLC47A1Q96FL8 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
SLC47A1Q96FL8 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
SLC47A1Q96FL8 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SLC47A1Q96FL8 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SLC47A1Q96FL8 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SLC47A1Q96FL8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SLC47A1Q96FL8 RPS2-210ENST00000530225 765 ntTSL 2 BASIC22.72■■□□□ 1.23
SLC47A1Q96FL8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.72■■□□□ 1.23
SLC47A1Q96FL8 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
SLC47A1Q96FL8 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
SLC47A1Q96FL8 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SLC47A1Q96FL8 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SLC47A1Q96FL8 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SLC47A1Q96FL8 AC022211.4-201ENST00000625094 2161 ntBASIC22.7■■□□□ 1.23
SLC47A1Q96FL8 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SLC47A1Q96FL8 DUX4L13-201ENST00000554103 1267 ntBASIC22.7■■□□□ 1.22
SLC47A1Q96FL8 DUX4L15-201ENST00000611059 1267 ntBASIC22.7■■□□□ 1.22
SLC47A1Q96FL8 DUX4L23-201ENST00000615195 1269 ntBASIC22.7■■□□□ 1.22
SLC47A1Q96FL8 DUX4L24-201ENST00000617576 1269 ntBASIC22.7■■□□□ 1.22
SLC47A1Q96FL8 DUX4L22-201ENST00000618238 1269 ntBASIC22.7■■□□□ 1.22
SLC47A1Q96FL8 DUX4L20-201ENST00000619712 1269 ntBASIC22.7■■□□□ 1.22
SLC47A1Q96FL8 DUX4L21-201ENST00000622058 1269 ntBASIC22.7■■□□□ 1.22
SLC47A1Q96FL8 DUX4L10-201ENST00000622460 1267 ntBASIC22.7■■□□□ 1.22
SLC47A1Q96FL8 DUX4L25-201ENST00000624915 1269 ntBASIC22.7■■□□□ 1.22
SLC47A1Q96FL8 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SLC47A1Q96FL8 AC138932.3-201ENST00000567634 1902 ntBASIC22.7■■□□□ 1.22
SLC47A1Q96FL8 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SLC47A1Q96FL8 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SLC47A1Q96FL8 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
SLC47A1Q96FL8 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SLC47A1Q96FL8 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.69■■□□□ 1.22
SLC47A1Q96FL8 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SLC47A1Q96FL8 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SLC47A1Q96FL8 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SLC47A1Q96FL8 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SLC47A1Q96FL8 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
SLC47A1Q96FL8 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.68■■□□□ 1.22
SLC47A1Q96FL8 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.68■■□□□ 1.22
SLC47A1Q96FL8 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SLC47A1Q96FL8 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.67■■□□□ 1.22
SLC47A1Q96FL8 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.67■■□□□ 1.22
SLC47A1Q96FL8 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.67■■□□□ 1.22
SLC47A1Q96FL8 AL139125.2-201ENST00000623134 1869 ntBASIC22.67■■□□□ 1.22
SLC47A1Q96FL8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SLC47A1Q96FL8 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
SLC47A1Q96FL8 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SLC47A1Q96FL8 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
SLC47A1Q96FL8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC22.67■■□□□ 1.22
SLC47A1Q96FL8 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SLC47A1Q96FL8 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC22.67■■□□□ 1.22
SLC47A1Q96FL8 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SLC47A1Q96FL8 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.67■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms