Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.58■■□□□ 1.05
TMEM54Q969K7 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.58■■□□□ 1.05
TMEM54Q969K7 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TMEM54Q969K7 GPX1-201ENST00000419349 1106 ntBASIC21.58■■□□□ 1.05
TMEM54Q969K7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.58■■□□□ 1.05
TMEM54Q969K7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
TMEM54Q969K7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
TMEM54Q969K7 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
TMEM54Q969K7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.58■■□□□ 1.04
TMEM54Q969K7 AC092803.2-201ENST00000564287 1899 ntBASIC21.58■■□□□ 1.04
TMEM54Q969K7 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TMEM54Q969K7 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TMEM54Q969K7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
TMEM54Q969K7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
TMEM54Q969K7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TMEM54Q969K7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.57■■□□□ 1.04
TMEM54Q969K7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TMEM54Q969K7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.57■■□□□ 1.04
TMEM54Q969K7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.56■■□□□ 1.04
TMEM54Q969K7 SMPD5-203ENST00000639008 1464 ntBASIC21.56■■□□□ 1.04
TMEM54Q969K7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.56■■□□□ 1.04
TMEM54Q969K7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TMEM54Q969K7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.55■■□□□ 1.04
TMEM54Q969K7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.55■■□□□ 1.04
TMEM54Q969K7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TMEM54Q969K7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.55■■□□□ 1.04
TMEM54Q969K7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TMEM54Q969K7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
TMEM54Q969K7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
TMEM54Q969K7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.54■■□□□ 1.04
TMEM54Q969K7 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.54■■□□□ 1.04
TMEM54Q969K7 AC145676.1-201ENST00000514988 2004 ntBASIC21.54■■□□□ 1.04
TMEM54Q969K7 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TMEM54Q969K7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.53■■□□□ 1.04
TMEM54Q969K7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TMEM54Q969K7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.53■■□□□ 1.04
TMEM54Q969K7 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TMEM54Q969K7 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.53■■□□□ 1.04
TMEM54Q969K7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TMEM54Q969K7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TMEM54Q969K7 DUSP8P4-201ENST00000399538 1761 ntBASIC21.52■■□□□ 1.04
TMEM54Q969K7 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.51■■□□□ 1.03
TMEM54Q969K7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
TMEM54Q969K7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.51■■□□□ 1.03
TMEM54Q969K7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM54Q969K7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.51■■□□□ 1.03
TMEM54Q969K7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.51■■□□□ 1.03
TMEM54Q969K7 MIR3960-201ENST00000583311 91 ntBASIC21.51■■□□□ 1.03
TMEM54Q969K7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.51■■□□□ 1.03
TMEM54Q969K7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
TMEM54Q969K7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM54Q969K7 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.5■■□□□ 1.03
TMEM54Q969K7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM54Q969K7 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM54Q969K7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM54Q969K7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM54Q969K7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.49■■□□□ 1.03
TMEM54Q969K7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TMEM54Q969K7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMEM54Q969K7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TMEM54Q969K7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
TMEM54Q969K7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
TMEM54Q969K7 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TMEM54Q969K7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.48■■□□□ 1.03
TMEM54Q969K7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.48■■□□□ 1.03
TMEM54Q969K7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.48■■□□□ 1.03
TMEM54Q969K7 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TMEM54Q969K7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
TMEM54Q969K7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMEM54Q969K7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TMEM54Q969K7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMEM54Q969K7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMEM54Q969K7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMEM54Q969K7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TMEM54Q969K7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.46■■□□□ 1.03
TMEM54Q969K7 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.46■■□□□ 1.03
TMEM54Q969K7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.46■■□□□ 1.03
TMEM54Q969K7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.46■■□□□ 1.03
TMEM54Q969K7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.46■■□□□ 1.03
TMEM54Q969K7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TMEM54Q969K7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.45■■□□□ 1.03
TMEM54Q969K7 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TMEM54Q969K7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TMEM54Q969K7 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.45■■□□□ 1.02
TMEM54Q969K7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.45■■□□□ 1.02
TMEM54Q969K7 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TMEM54Q969K7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TMEM54Q969K7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.45■■□□□ 1.02
TMEM54Q969K7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.45■■□□□ 1.02
TMEM54Q969K7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TMEM54Q969K7 RNF126P1-201ENST00000567452 1320 ntBASIC21.45■■□□□ 1.02
TMEM54Q969K7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TMEM54Q969K7 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TMEM54Q969K7 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TMEM54Q969K7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TMEM54Q969K7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
TMEM54Q969K7 RP9P-202ENST00000450133 1212 ntBASIC21.44■■□□□ 1.02
TMEM54Q969K7 AC007029.1-201ENST00000604183 313 ntBASIC21.44■■□□□ 1.02
TMEM54Q969K7 AC010501.1-201ENST00000606270 1962 ntBASIC21.44■■□□□ 1.02
TMEM54Q969K7 ERN1-208ENST00000606895 2068 ntBASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms