Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 WHAMMP3-201ENST00000611636 1609 ntBASIC20.83■□□□□ 0.93
SMIM4Q8WVI0 SETD8P1-201ENST00000623146 1180 ntBASIC20.83■□□□□ 0.93
SMIM4Q8WVI0 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SMIM4Q8WVI0 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMIM4Q8WVI0 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMIM4Q8WVI0 LINC00273-201ENST00000539813 1452 ntBASIC20.82■□□□□ 0.92
SMIM4Q8WVI0 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.82■□□□□ 0.92
SMIM4Q8WVI0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SMIM4Q8WVI0 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMIM4Q8WVI0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMIM4Q8WVI0 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.82■□□□□ 0.92
SMIM4Q8WVI0 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMIM4Q8WVI0 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMIM4Q8WVI0 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
SMIM4Q8WVI0 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.81■□□□□ 0.92
SMIM4Q8WVI0 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMIM4Q8WVI0 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMIM4Q8WVI0 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.81■□□□□ 0.92
SMIM4Q8WVI0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMIM4Q8WVI0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMIM4Q8WVI0 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMIM4Q8WVI0 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SMIM4Q8WVI0 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.8■□□□□ 0.92
SMIM4Q8WVI0 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMIM4Q8WVI0 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMIM4Q8WVI0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMIM4Q8WVI0 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SMIM4Q8WVI0 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SMIM4Q8WVI0 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMIM4Q8WVI0 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SMIM4Q8WVI0 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SMIM4Q8WVI0 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
SMIM4Q8WVI0 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.79■□□□□ 0.92
SMIM4Q8WVI0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMIM4Q8WVI0 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SMIM4Q8WVI0 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.78■□□□□ 0.92
SMIM4Q8WVI0 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SMIM4Q8WVI0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SMIM4Q8WVI0 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMIM4Q8WVI0 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SMIM4Q8WVI0 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SMIM4Q8WVI0 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMIM4Q8WVI0 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMIM4Q8WVI0 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.77■□□□□ 0.92
SMIM4Q8WVI0 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMIM4Q8WVI0 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SMIM4Q8WVI0 AC068473.5-201ENST00000616428 2072 ntBASIC20.77■□□□□ 0.92
SMIM4Q8WVI0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.77■□□□□ 0.91
SMIM4Q8WVI0 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SMIM4Q8WVI0 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.76■□□□□ 0.91
SMIM4Q8WVI0 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMIM4Q8WVI0 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMIM4Q8WVI0 RARRES2P7-201ENST00000567349 469 ntBASIC20.76■□□□□ 0.91
SMIM4Q8WVI0 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SMIM4Q8WVI0 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMIM4Q8WVI0 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.76■□□□□ 0.91
SMIM4Q8WVI0 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.76■□□□□ 0.91
SMIM4Q8WVI0 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.75■□□□□ 0.91
SMIM4Q8WVI0 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SMIM4Q8WVI0 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.75■□□□□ 0.91
SMIM4Q8WVI0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMIM4Q8WVI0 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.75■□□□□ 0.91
SMIM4Q8WVI0 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
SMIM4Q8WVI0 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SMIM4Q8WVI0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMIM4Q8WVI0 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMIM4Q8WVI0 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMIM4Q8WVI0 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMIM4Q8WVI0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMIM4Q8WVI0 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMIM4Q8WVI0 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMIM4Q8WVI0 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMIM4Q8WVI0 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMIM4Q8WVI0 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.72■□□□□ 0.91
SMIM4Q8WVI0 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMIM4Q8WVI0 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMIM4Q8WVI0 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMIM4Q8WVI0 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMIM4Q8WVI0 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SMIM4Q8WVI0 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.71■□□□□ 0.91
SMIM4Q8WVI0 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.71■□□□□ 0.91
SMIM4Q8WVI0 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMIM4Q8WVI0 LINC01124-201ENST00000409786 2117 ntBASIC20.71■□□□□ 0.91
SMIM4Q8WVI0 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
SMIM4Q8WVI0 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
SMIM4Q8WVI0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.7■□□□□ 0.9
SMIM4Q8WVI0 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.7■□□□□ 0.9
SMIM4Q8WVI0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SMIM4Q8WVI0 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMIM4Q8WVI0 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMIM4Q8WVI0 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMIM4Q8WVI0 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SMIM4Q8WVI0 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMIM4Q8WVI0 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMIM4Q8WVI0 CAHM-201ENST00000604200 896 ntBASIC20.69■□□□□ 0.9
SMIM4Q8WVI0 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SMIM4Q8WVI0 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SMIM4Q8WVI0 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMIM4Q8WVI0 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.69■□□□□ 0.9
SMIM4Q8WVI0 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms