Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC30.37■■■□□ 2.45
RTL9Q8NET4 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC30.36■■■□□ 2.45
RTL9Q8NET4 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
RTL9Q8NET4 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
RTL9Q8NET4 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
RTL9Q8NET4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
RTL9Q8NET4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC30.35■■■□□ 2.45
RTL9Q8NET4 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC30.35■■■□□ 2.45
RTL9Q8NET4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC30.34■■■□□ 2.45
RTL9Q8NET4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC30.34■■■□□ 2.45
RTL9Q8NET4 HYI-210ENST00000486909 905 ntTSL 5 BASIC30.34■■■□□ 2.45
RTL9Q8NET4 PVT1_1.1-201ENST00000615125 194 ntBASIC30.34■■■□□ 2.45
RTL9Q8NET4 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
RTL9Q8NET4 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC30.33■■■□□ 2.45
RTL9Q8NET4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
RTL9Q8NET4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC30.33■■■□□ 2.45
RTL9Q8NET4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
RTL9Q8NET4 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC30.32■■■□□ 2.44
RTL9Q8NET4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC30.32■■■□□ 2.44
RTL9Q8NET4 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC30.32■■■□□ 2.44
RTL9Q8NET4 AC139795.1-202ENST00000500444 432 ntBASIC30.32■■■□□ 2.44
RTL9Q8NET4 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
RTL9Q8NET4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
RTL9Q8NET4 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC30.31■■■□□ 2.44
RTL9Q8NET4 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
RTL9Q8NET4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
RTL9Q8NET4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
RTL9Q8NET4 BHLHE23-202ENST00000612929 1109 ntBASIC30.3■■■□□ 2.44
RTL9Q8NET4 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
RTL9Q8NET4 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
RTL9Q8NET4 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
RTL9Q8NET4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
RTL9Q8NET4 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
RTL9Q8NET4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
RTL9Q8NET4 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
RTL9Q8NET4 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC30.29■■■□□ 2.44
RTL9Q8NET4 BX255925.1-201ENST00000566954 1854 ntBASIC30.29■■■□□ 2.44
RTL9Q8NET4 KRT8P33-201ENST00000508125 1423 ntBASIC30.29■■■□□ 2.44
RTL9Q8NET4 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
RTL9Q8NET4 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
RTL9Q8NET4 AC103834.1-201ENST00000520383 144 ntBASIC30.28■■■□□ 2.44
RTL9Q8NET4 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
RTL9Q8NET4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC30.28■■■□□ 2.44
RTL9Q8NET4 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC30.28■■■□□ 2.44
RTL9Q8NET4 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC30.27■■■□□ 2.44
RTL9Q8NET4 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
RTL9Q8NET4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
RTL9Q8NET4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC30.27■■■□□ 2.44
RTL9Q8NET4 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
RTL9Q8NET4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
RTL9Q8NET4 IDNK-201ENST00000376417 511 ntTSL 5 BASIC30.27■■■□□ 2.44
RTL9Q8NET4 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
RTL9Q8NET4 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC30.27■■■□□ 2.44
RTL9Q8NET4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC30.27■■■□□ 2.44
RTL9Q8NET4 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
RTL9Q8NET4 MIR4508-201ENST00000584178 70 ntBASIC30.26■■■□□ 2.43
RTL9Q8NET4 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
RTL9Q8NET4 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
RTL9Q8NET4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
RTL9Q8NET4 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
RTL9Q8NET4 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
RTL9Q8NET4 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC30.25■■■□□ 2.43
RTL9Q8NET4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC30.25■■■□□ 2.43
RTL9Q8NET4 AC087393.1-201ENST00000582896 145 ntBASIC30.25■■■□□ 2.43
RTL9Q8NET4 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC30.25■■■□□ 2.43
RTL9Q8NET4 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
RTL9Q8NET4 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
RTL9Q8NET4 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
RTL9Q8NET4 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC30.23■■■□□ 2.43
RTL9Q8NET4 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
RTL9Q8NET4 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
RTL9Q8NET4 AC019171.1-201ENST00000601251 1056 ntBASIC30.23■■■□□ 2.43
RTL9Q8NET4 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
RTL9Q8NET4 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC30.22■■■□□ 2.43
RTL9Q8NET4 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
RTL9Q8NET4 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC30.22■■■□□ 2.43
RTL9Q8NET4 AC009299.2-201ENST00000482477 511 ntBASIC30.22■■■□□ 2.43
RTL9Q8NET4 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
RTL9Q8NET4 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC30.22■■■□□ 2.43
RTL9Q8NET4 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC30.22■■■□□ 2.43
RTL9Q8NET4 AC142472.1-201ENST00000612013 1741 ntBASIC30.22■■■□□ 2.43
RTL9Q8NET4 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
RTL9Q8NET4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC30.21■■■□□ 2.43
RTL9Q8NET4 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC30.21■■■□□ 2.43
RTL9Q8NET4 MTX2-204ENST00000443241 799 ntTSL 3 BASIC30.21■■■□□ 2.43
RTL9Q8NET4 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
RTL9Q8NET4 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
RTL9Q8NET4 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC30.21■■■□□ 2.43
RTL9Q8NET4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC30.21■■■□□ 2.43
RTL9Q8NET4 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
RTL9Q8NET4 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
RTL9Q8NET4 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
RTL9Q8NET4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC30.2■■■□□ 2.43
RTL9Q8NET4 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
RTL9Q8NET4 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC30.2■■■□□ 2.42
RTL9Q8NET4 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC30.2■■■□□ 2.42
RTL9Q8NET4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
RTL9Q8NET4 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC30.19■■■□□ 2.42
RTL9Q8NET4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
RTL9Q8NET4 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC30.19■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms