Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CNEP1R1Q8N9A8 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CNEP1R1Q8N9A8 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.68■■□□□ 1.06
CNEP1R1Q8N9A8 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.68■■□□□ 1.06
CNEP1R1Q8N9A8 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CNEP1R1Q8N9A8 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNEP1R1Q8N9A8 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNEP1R1Q8N9A8 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.67■■□□□ 1.06
CNEP1R1Q8N9A8 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.67■■□□□ 1.06
CNEP1R1Q8N9A8 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNEP1R1Q8N9A8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CNEP1R1Q8N9A8 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CNEP1R1Q8N9A8 AC018755.3-202ENST00000596210 929 ntBASIC21.66■■□□□ 1.06
CNEP1R1Q8N9A8 BHLHE23-202ENST00000612929 1109 ntBASIC21.66■■□□□ 1.06
CNEP1R1Q8N9A8 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
CNEP1R1Q8N9A8 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNEP1R1Q8N9A8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.65■■□□□ 1.06
CNEP1R1Q8N9A8 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CNEP1R1Q8N9A8 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNEP1R1Q8N9A8 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNEP1R1Q8N9A8 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CNEP1R1Q8N9A8 SPCS2P3-201ENST00000500401 656 ntBASIC21.65■■□□□ 1.06
CNEP1R1Q8N9A8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CNEP1R1Q8N9A8 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNEP1R1Q8N9A8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
CNEP1R1Q8N9A8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
CNEP1R1Q8N9A8 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CNEP1R1Q8N9A8 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.64■■□□□ 1.05
CNEP1R1Q8N9A8 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CNEP1R1Q8N9A8 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CNEP1R1Q8N9A8 MIR6765-201ENST00000614092 87 ntBASIC21.64■■□□□ 1.05
CNEP1R1Q8N9A8 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNEP1R1Q8N9A8 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.63■■□□□ 1.05
CNEP1R1Q8N9A8 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CNEP1R1Q8N9A8 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.62■■□□□ 1.05
CNEP1R1Q8N9A8 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.62■■□□□ 1.05
CNEP1R1Q8N9A8 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CNEP1R1Q8N9A8 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CNEP1R1Q8N9A8 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CNEP1R1Q8N9A8 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CNEP1R1Q8N9A8 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
CNEP1R1Q8N9A8 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
CNEP1R1Q8N9A8 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.61■■□□□ 1.05
CNEP1R1Q8N9A8 AC139795.1-202ENST00000500444 432 ntBASIC21.61■■□□□ 1.05
CNEP1R1Q8N9A8 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CNEP1R1Q8N9A8 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNEP1R1Q8N9A8 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CNEP1R1Q8N9A8 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNEP1R1Q8N9A8 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNEP1R1Q8N9A8 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
CNEP1R1Q8N9A8 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.59■■□□□ 1.05
CNEP1R1Q8N9A8 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CNEP1R1Q8N9A8 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CNEP1R1Q8N9A8 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.59■■□□□ 1.05
CNEP1R1Q8N9A8 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CNEP1R1Q8N9A8 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.59■■□□□ 1.05
CNEP1R1Q8N9A8 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CNEP1R1Q8N9A8 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
CNEP1R1Q8N9A8 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
CNEP1R1Q8N9A8 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CNEP1R1Q8N9A8 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CNEP1R1Q8N9A8 AP004609.3-201ENST00000610705 1884 ntBASIC21.58■■□□□ 1.05
CNEP1R1Q8N9A8 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CNEP1R1Q8N9A8 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CNEP1R1Q8N9A8 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CNEP1R1Q8N9A8 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CNEP1R1Q8N9A8 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.57■■□□□ 1.04
CNEP1R1Q8N9A8 AC142472.1-201ENST00000612013 1741 ntBASIC21.57■■□□□ 1.04
CNEP1R1Q8N9A8 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CNEP1R1Q8N9A8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.56■■□□□ 1.04
CNEP1R1Q8N9A8 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.56■■□□□ 1.04
CNEP1R1Q8N9A8 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
CNEP1R1Q8N9A8 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CNEP1R1Q8N9A8 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.55■■□□□ 1.04
CNEP1R1Q8N9A8 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.55■■□□□ 1.04
CNEP1R1Q8N9A8 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CNEP1R1Q8N9A8 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CNEP1R1Q8N9A8 RARRES2P1-201ENST00000474487 481 ntBASIC21.55■■□□□ 1.04
CNEP1R1Q8N9A8 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CNEP1R1Q8N9A8 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CNEP1R1Q8N9A8 AC010980.1-201ENST00000587192 1142 ntBASIC21.54■■□□□ 1.04
CNEP1R1Q8N9A8 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
CNEP1R1Q8N9A8 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.54■■□□□ 1.04
CNEP1R1Q8N9A8 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CNEP1R1Q8N9A8 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CNEP1R1Q8N9A8 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CNEP1R1Q8N9A8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CNEP1R1Q8N9A8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CNEP1R1Q8N9A8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CNEP1R1Q8N9A8 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CNEP1R1Q8N9A8 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CNEP1R1Q8N9A8 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CNEP1R1Q8N9A8 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CNEP1R1Q8N9A8 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.52■■□□□ 1.04
CNEP1R1Q8N9A8 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CNEP1R1Q8N9A8 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.52■■□□□ 1.04
CNEP1R1Q8N9A8 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.52■■□□□ 1.04
CNEP1R1Q8N9A8 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.52■■□□□ 1.04
CNEP1R1Q8N9A8 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CNEP1R1Q8N9A8 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms