Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
PGBD3Q8N328 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
PGBD3Q8N328 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
PGBD3Q8N328 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PGBD3Q8N328 WHAMMP3-201ENST00000611636 1609 ntBASIC24.77■■□□□ 1.56
PGBD3Q8N328 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PGBD3Q8N328 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PGBD3Q8N328 AC142086.6-201ENST00000621154 1765 ntBASIC24.77■■□□□ 1.56
PGBD3Q8N328 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PGBD3Q8N328 AC009299.2-201ENST00000482477 511 ntBASIC24.76■■□□□ 1.55
PGBD3Q8N328 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PGBD3Q8N328 PVT1_1.1-201ENST00000615125 194 ntBASIC24.76■■□□□ 1.55
PGBD3Q8N328 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PGBD3Q8N328 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
PGBD3Q8N328 AC103834.1-201ENST00000520383 144 ntBASIC24.75■■□□□ 1.55
PGBD3Q8N328 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC24.75■■□□□ 1.55
PGBD3Q8N328 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PGBD3Q8N328 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PGBD3Q8N328 IDNK-203ENST00000405990 629 ntTSL 2 BASIC24.74■■□□□ 1.55
PGBD3Q8N328 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC24.74■■□□□ 1.55
PGBD3Q8N328 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24.74■■□□□ 1.55
PGBD3Q8N328 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.74■■□□□ 1.55
PGBD3Q8N328 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PGBD3Q8N328 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PGBD3Q8N328 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PGBD3Q8N328 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PGBD3Q8N328 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.73■■□□□ 1.55
PGBD3Q8N328 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.72■■□□□ 1.55
PGBD3Q8N328 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
PGBD3Q8N328 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PGBD3Q8N328 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
PGBD3Q8N328 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PGBD3Q8N328 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
PGBD3Q8N328 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC24.72■■□□□ 1.55
PGBD3Q8N328 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PGBD3Q8N328 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
PGBD3Q8N328 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PGBD3Q8N328 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PGBD3Q8N328 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PGBD3Q8N328 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PGBD3Q8N328 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC24.71■■□□□ 1.55
PGBD3Q8N328 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PGBD3Q8N328 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PGBD3Q8N328 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PGBD3Q8N328 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PGBD3Q8N328 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PGBD3Q8N328 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
PGBD3Q8N328 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC24.7■■□□□ 1.54
PGBD3Q8N328 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC24.7■■□□□ 1.54
PGBD3Q8N328 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PGBD3Q8N328 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PGBD3Q8N328 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
PGBD3Q8N328 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC24.69■■□□□ 1.54
PGBD3Q8N328 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.69■■□□□ 1.54
PGBD3Q8N328 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC24.69■■□□□ 1.54
PGBD3Q8N328 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
PGBD3Q8N328 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.68■■□□□ 1.54
PGBD3Q8N328 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
PGBD3Q8N328 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PGBD3Q8N328 MIR4508-201ENST00000584178 70 ntBASIC24.68■■□□□ 1.54
PGBD3Q8N328 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PGBD3Q8N328 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.68■■□□□ 1.54
PGBD3Q8N328 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.68■■□□□ 1.54
PGBD3Q8N328 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PGBD3Q8N328 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
PGBD3Q8N328 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC24.66■■□□□ 1.54
PGBD3Q8N328 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PGBD3Q8N328 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
PGBD3Q8N328 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PGBD3Q8N328 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
PGBD3Q8N328 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PGBD3Q8N328 HES6-204ENST00000409182 863 ntTSL 2 BASIC24.65■■□□□ 1.54
PGBD3Q8N328 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
PGBD3Q8N328 MTX2-204ENST00000443241 799 ntTSL 3 BASIC24.65■■□□□ 1.54
PGBD3Q8N328 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PGBD3Q8N328 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
PGBD3Q8N328 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC24.64■■□□□ 1.54
PGBD3Q8N328 IDNK-201ENST00000376417 511 ntTSL 5 BASIC24.64■■□□□ 1.54
PGBD3Q8N328 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PGBD3Q8N328 AL031848.2-201ENST00000607670 837 ntBASIC24.64■■□□□ 1.54
PGBD3Q8N328 AC131212.1-201ENST00000613771 668 ntBASIC24.64■■□□□ 1.54
PGBD3Q8N328 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.64■■□□□ 1.53
PGBD3Q8N328 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PGBD3Q8N328 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
PGBD3Q8N328 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
PGBD3Q8N328 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
PGBD3Q8N328 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PGBD3Q8N328 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PGBD3Q8N328 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PGBD3Q8N328 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
PGBD3Q8N328 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
PGBD3Q8N328 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC24.63■■□□□ 1.53
PGBD3Q8N328 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PGBD3Q8N328 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC24.62■■□□□ 1.53
PGBD3Q8N328 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PGBD3Q8N328 AC103724.3-201ENST00000564481 992 ntBASIC24.61■■□□□ 1.53
PGBD3Q8N328 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC24.61■■□□□ 1.53
PGBD3Q8N328 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
PGBD3Q8N328 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PGBD3Q8N328 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms