Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC27.37■■□□□ 1.97
TRIM50Q86XT4 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC27.37■■□□□ 1.97
TRIM50Q86XT4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
TRIM50Q86XT4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC27.36■■□□□ 1.97
TRIM50Q86XT4 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
TRIM50Q86XT4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
TRIM50Q86XT4 AC018755.3-202ENST00000596210 929 ntBASIC27.35■■□□□ 1.97
TRIM50Q86XT4 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
TRIM50Q86XT4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
TRIM50Q86XT4 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
TRIM50Q86XT4 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
TRIM50Q86XT4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
TRIM50Q86XT4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC27.34■■□□□ 1.97
TRIM50Q86XT4 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC27.34■■□□□ 1.97
TRIM50Q86XT4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC27.33■■□□□ 1.97
TRIM50Q86XT4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC27.33■■□□□ 1.97
TRIM50Q86XT4 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC27.33■■□□□ 1.97
TRIM50Q86XT4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC27.32■■□□□ 1.96
TRIM50Q86XT4 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
TRIM50Q86XT4 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
TRIM50Q86XT4 KRT8P33-201ENST00000508125 1423 ntBASIC27.32■■□□□ 1.96
TRIM50Q86XT4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TRIM50Q86XT4 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
TRIM50Q86XT4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TRIM50Q86XT4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC27.31■■□□□ 1.96
TRIM50Q86XT4 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TRIM50Q86XT4 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC27.31■■□□□ 1.96
TRIM50Q86XT4 BX255925.1-201ENST00000566954 1854 ntBASIC27.3■■□□□ 1.96
TRIM50Q86XT4 AC139795.1-202ENST00000500444 432 ntBASIC27.3■■□□□ 1.96
TRIM50Q86XT4 PVT1_1.1-201ENST00000615125 194 ntBASIC27.3■■□□□ 1.96
TRIM50Q86XT4 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
TRIM50Q86XT4 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
TRIM50Q86XT4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC27.3■■□□□ 1.96
TRIM50Q86XT4 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC27.3■■□□□ 1.96
TRIM50Q86XT4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
TRIM50Q86XT4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
TRIM50Q86XT4 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
TRIM50Q86XT4 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
TRIM50Q86XT4 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
TRIM50Q86XT4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
TRIM50Q86XT4 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC27.29■■□□□ 1.96
TRIM50Q86XT4 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
TRIM50Q86XT4 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
TRIM50Q86XT4 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TRIM50Q86XT4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
TRIM50Q86XT4 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
TRIM50Q86XT4 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
TRIM50Q86XT4 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
TRIM50Q86XT4 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
TRIM50Q86XT4 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
TRIM50Q86XT4 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TRIM50Q86XT4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC27.26■■□□□ 1.95
TRIM50Q86XT4 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC27.26■■□□□ 1.95
TRIM50Q86XT4 AL451085.2-201ENST00000605085 799 ntBASIC27.26■■□□□ 1.95
TRIM50Q86XT4 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
TRIM50Q86XT4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TRIM50Q86XT4 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
TRIM50Q86XT4 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
TRIM50Q86XT4 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
TRIM50Q86XT4 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
TRIM50Q86XT4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC27.24■■□□□ 1.95
TRIM50Q86XT4 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC27.24■■□□□ 1.95
TRIM50Q86XT4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC27.24■■□□□ 1.95
TRIM50Q86XT4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC27.24■■□□□ 1.95
TRIM50Q86XT4 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC27.24■■□□□ 1.95
TRIM50Q86XT4 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
TRIM50Q86XT4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC27.23■■□□□ 1.95
TRIM50Q86XT4 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
TRIM50Q86XT4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC27.23■■□□□ 1.95
TRIM50Q86XT4 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
TRIM50Q86XT4 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC27.23■■□□□ 1.95
TRIM50Q86XT4 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC27.22■■□□□ 1.95
TRIM50Q86XT4 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
TRIM50Q86XT4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC27.22■■□□□ 1.95
TRIM50Q86XT4 AC103834.1-201ENST00000520383 144 ntBASIC27.22■■□□□ 1.95
TRIM50Q86XT4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
TRIM50Q86XT4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
TRIM50Q86XT4 AC074183.2-201ENST00000623112 922 ntBASIC27.22■■□□□ 1.95
TRIM50Q86XT4 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC27.22■■□□□ 1.95
TRIM50Q86XT4 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
TRIM50Q86XT4 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
TRIM50Q86XT4 HYI-210ENST00000486909 905 ntTSL 5 BASIC27.21■■□□□ 1.95
TRIM50Q86XT4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC27.21■■□□□ 1.95
TRIM50Q86XT4 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
TRIM50Q86XT4 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
TRIM50Q86XT4 AC142086.6-201ENST00000621154 1765 ntBASIC27.2■■□□□ 1.95
TRIM50Q86XT4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.94
TRIM50Q86XT4 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC27.2■■□□□ 1.94
TRIM50Q86XT4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC27.19■■□□□ 1.94
TRIM50Q86XT4 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
TRIM50Q86XT4 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
TRIM50Q86XT4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
TRIM50Q86XT4 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC27.19■■□□□ 1.94
TRIM50Q86XT4 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
TRIM50Q86XT4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
TRIM50Q86XT4 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
TRIM50Q86XT4 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
TRIM50Q86XT4 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
TRIM50Q86XT4 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC27.18■■□□□ 1.94
TRIM50Q86XT4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC27.18■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms