Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.28■■□□□ 1.48
ZC3HC1Q86WB0 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
ZC3HC1Q86WB0 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC24.27■■□□□ 1.48
ZC3HC1Q86WB0 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
ZC3HC1Q86WB0 MED25-210ENST00000612854 801 ntTSL 5 BASIC24.27■■□□□ 1.48
ZC3HC1Q86WB0 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
ZC3HC1Q86WB0 MED25-214ENST00000622402 642 ntTSL 5 BASIC24.27■■□□□ 1.48
ZC3HC1Q86WB0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
ZC3HC1Q86WB0 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
ZC3HC1Q86WB0 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.26■■□□□ 1.47
ZC3HC1Q86WB0 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
ZC3HC1Q86WB0 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
ZC3HC1Q86WB0 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC24.25■■□□□ 1.47
ZC3HC1Q86WB0 MIR3648-2-201ENST00000581792 180 ntBASIC24.25■■□□□ 1.47
ZC3HC1Q86WB0 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC24.25■■□□□ 1.47
ZC3HC1Q86WB0 MIR3648-1-201ENST00000615959 180 ntBASIC24.25■■□□□ 1.47
ZC3HC1Q86WB0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
ZC3HC1Q86WB0 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ZC3HC1Q86WB0 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ZC3HC1Q86WB0 AL359504.2-201ENST00000605506 1601 ntBASIC24.24■■□□□ 1.47
ZC3HC1Q86WB0 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
ZC3HC1Q86WB0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC24.24■■□□□ 1.47
ZC3HC1Q86WB0 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ZC3HC1Q86WB0 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ZC3HC1Q86WB0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.23■■□□□ 1.47
ZC3HC1Q86WB0 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC24.22■■□□□ 1.47
ZC3HC1Q86WB0 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
ZC3HC1Q86WB0 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
ZC3HC1Q86WB0 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
ZC3HC1Q86WB0 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
ZC3HC1Q86WB0 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
ZC3HC1Q86WB0 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
ZC3HC1Q86WB0 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
ZC3HC1Q86WB0 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
ZC3HC1Q86WB0 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
ZC3HC1Q86WB0 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC24.21■■□□□ 1.47
ZC3HC1Q86WB0 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.47
ZC3HC1Q86WB0 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
ZC3HC1Q86WB0 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
ZC3HC1Q86WB0 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC24.2■■□□□ 1.46
ZC3HC1Q86WB0 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
ZC3HC1Q86WB0 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.19■■□□□ 1.46
ZC3HC1Q86WB0 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC24.19■■□□□ 1.46
ZC3HC1Q86WB0 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC24.19■■□□□ 1.46
ZC3HC1Q86WB0 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
ZC3HC1Q86WB0 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
ZC3HC1Q86WB0 CEBPA-AS1-201ENST00000592982 2198 ntBASIC24.18■■□□□ 1.46
ZC3HC1Q86WB0 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
ZC3HC1Q86WB0 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
ZC3HC1Q86WB0 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
ZC3HC1Q86WB0 AC016575.1-201ENST00000607026 382 ntBASIC24.17■■□□□ 1.46
ZC3HC1Q86WB0 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
ZC3HC1Q86WB0 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
ZC3HC1Q86WB0 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
ZC3HC1Q86WB0 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
ZC3HC1Q86WB0 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
ZC3HC1Q86WB0 METRNL-202ENST00000570778 967 ntTSL 5 BASIC24.16■■□□□ 1.46
ZC3HC1Q86WB0 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
ZC3HC1Q86WB0 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
ZC3HC1Q86WB0 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
ZC3HC1Q86WB0 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
ZC3HC1Q86WB0 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24.16■■□□□ 1.46
ZC3HC1Q86WB0 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.15■■□□□ 1.46
ZC3HC1Q86WB0 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.15■■□□□ 1.46
ZC3HC1Q86WB0 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
ZC3HC1Q86WB0 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC24.15■■□□□ 1.46
ZC3HC1Q86WB0 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
ZC3HC1Q86WB0 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
ZC3HC1Q86WB0 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
ZC3HC1Q86WB0 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
ZC3HC1Q86WB0 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.14■■□□□ 1.46
ZC3HC1Q86WB0 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
ZC3HC1Q86WB0 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC24.14■■□□□ 1.45
ZC3HC1Q86WB0 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC24.14■■□□□ 1.45
ZC3HC1Q86WB0 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
ZC3HC1Q86WB0 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
ZC3HC1Q86WB0 AC096887.2-201ENST00000623443 1957 ntBASIC24.14■■□□□ 1.45
ZC3HC1Q86WB0 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ZC3HC1Q86WB0 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ZC3HC1Q86WB0 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
ZC3HC1Q86WB0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ZC3HC1Q86WB0 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
ZC3HC1Q86WB0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
ZC3HC1Q86WB0 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
ZC3HC1Q86WB0 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
ZC3HC1Q86WB0 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
ZC3HC1Q86WB0 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ZC3HC1Q86WB0 AC126177.7-201ENST00000547904 679 ntBASIC24.12■■□□□ 1.45
ZC3HC1Q86WB0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.12■■□□□ 1.45
ZC3HC1Q86WB0 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ZC3HC1Q86WB0 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
ZC3HC1Q86WB0 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC24.11■■□□□ 1.45
ZC3HC1Q86WB0 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC24.11■■□□□ 1.45
ZC3HC1Q86WB0 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
ZC3HC1Q86WB0 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC24.11■■□□□ 1.45
ZC3HC1Q86WB0 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
ZC3HC1Q86WB0 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
ZC3HC1Q86WB0 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
ZC3HC1Q86WB0 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24.09■■□□□ 1.45
ZC3HC1Q86WB0 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC24.08■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms