Protein–RNA interactions for Protein: Q7RTT5

SSX7, Protein SSX7, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX7Q7RTT5 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSX7Q7RTT5 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SSX7Q7RTT5 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SSX7Q7RTT5 AC142472.1-201ENST00000612013 1741 ntBASIC19.27■□□□□ 0.68
SSX7Q7RTT5 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SSX7Q7RTT5 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSX7Q7RTT5 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SSX7Q7RTT5 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSX7Q7RTT5 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC19.26■□□□□ 0.67
SSX7Q7RTT5 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSX7Q7RTT5 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.26■□□□□ 0.67
SSX7Q7RTT5 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC19.25■□□□□ 0.67
SSX7Q7RTT5 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SSX7Q7RTT5 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SSX7Q7RTT5 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSX7Q7RTT5 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSX7Q7RTT5 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SSX7Q7RTT5 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC19.24■□□□□ 0.67
SSX7Q7RTT5 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.24■□□□□ 0.67
SSX7Q7RTT5 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SSX7Q7RTT5 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SSX7Q7RTT5 AC097358.2-201ENST00000607541 1159 ntBASIC19.24■□□□□ 0.67
SSX7Q7RTT5 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSX7Q7RTT5 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.24■□□□□ 0.67
SSX7Q7RTT5 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSX7Q7RTT5 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SSX7Q7RTT5 AC022211.4-201ENST00000625094 2161 ntBASIC19.23■□□□□ 0.67
SSX7Q7RTT5 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSX7Q7RTT5 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.23■□□□□ 0.67
SSX7Q7RTT5 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SSX7Q7RTT5 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSX7Q7RTT5 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSX7Q7RTT5 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSX7Q7RTT5 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSX7Q7RTT5 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC19.23■□□□□ 0.67
SSX7Q7RTT5 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSX7Q7RTT5 AC010501.1-201ENST00000606270 1962 ntBASIC19.23■□□□□ 0.67
SSX7Q7RTT5 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSX7Q7RTT5 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SSX7Q7RTT5 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSX7Q7RTT5 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.21■□□□□ 0.67
SSX7Q7RTT5 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SSX7Q7RTT5 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSX7Q7RTT5 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SSX7Q7RTT5 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SSX7Q7RTT5 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.21■□□□□ 0.67
SSX7Q7RTT5 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC19.21■□□□□ 0.67
SSX7Q7RTT5 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSX7Q7RTT5 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.21■□□□□ 0.67
SSX7Q7RTT5 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.2■□□□□ 0.66
SSX7Q7RTT5 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.2■□□□□ 0.66
SSX7Q7RTT5 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SSX7Q7RTT5 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
SSX7Q7RTT5 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC19.2■□□□□ 0.66
SSX7Q7RTT5 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.2■□□□□ 0.66
SSX7Q7RTT5 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSX7Q7RTT5 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSX7Q7RTT5 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SSX7Q7RTT5 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.19■□□□□ 0.66
SSX7Q7RTT5 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSX7Q7RTT5 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SSX7Q7RTT5 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SSX7Q7RTT5 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SSX7Q7RTT5 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSX7Q7RTT5 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSX7Q7RTT5 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSX7Q7RTT5 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SSX7Q7RTT5 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SSX7Q7RTT5 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.18■□□□□ 0.66
SSX7Q7RTT5 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSX7Q7RTT5 EBPL-202ENST00000378268 680 ntTSL 3 BASIC19.18■□□□□ 0.66
SSX7Q7RTT5 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSX7Q7RTT5 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSX7Q7RTT5 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSX7Q7RTT5 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSX7Q7RTT5 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SSX7Q7RTT5 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SSX7Q7RTT5 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSX7Q7RTT5 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSX7Q7RTT5 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSX7Q7RTT5 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SSX7Q7RTT5 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.17■□□□□ 0.66
SSX7Q7RTT5 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.17■□□□□ 0.66
SSX7Q7RTT5 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSX7Q7RTT5 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSX7Q7RTT5 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SSX7Q7RTT5 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.16■□□□□ 0.66
SSX7Q7RTT5 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SSX7Q7RTT5 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.16■□□□□ 0.66
SSX7Q7RTT5 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSX7Q7RTT5 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSX7Q7RTT5 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SSX7Q7RTT5 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SSX7Q7RTT5 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SSX7Q7RTT5 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSX7Q7RTT5 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSX7Q7RTT5 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SSX7Q7RTT5 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SSX7Q7RTT5 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SSX7Q7RTT5 AC136428.2-201ENST00000563187 214 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms