Protein–RNA interactions for Protein: Q6ZMD2

SPNS3, Protein spinster homolog 3, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3Q6ZMD2 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.03■□□□□ 0.96
SPNS3Q6ZMD2 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.03■□□□□ 0.96
SPNS3Q6ZMD2 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.03■□□□□ 0.96
SPNS3Q6ZMD2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPNS3Q6ZMD2 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.03■□□□□ 0.96
SPNS3Q6ZMD2 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPNS3Q6ZMD2 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SPNS3Q6ZMD2 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.02■□□□□ 0.96
SPNS3Q6ZMD2 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
SPNS3Q6ZMD2 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.02■□□□□ 0.96
SPNS3Q6ZMD2 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.02■□□□□ 0.96
SPNS3Q6ZMD2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SPNS3Q6ZMD2 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
SPNS3Q6ZMD2 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPNS3Q6ZMD2 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPNS3Q6ZMD2 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPNS3Q6ZMD2 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.01■□□□□ 0.95
SPNS3Q6ZMD2 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPNS3Q6ZMD2 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.01■□□□□ 0.95
SPNS3Q6ZMD2 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPNS3Q6ZMD2 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
SPNS3Q6ZMD2 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPNS3Q6ZMD2 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21■□□□□ 0.95
SPNS3Q6ZMD2 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21■□□□□ 0.95
SPNS3Q6ZMD2 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SPNS3Q6ZMD2 ST7-AS1-201ENST00000456775 1889 ntBASIC21■□□□□ 0.95
SPNS3Q6ZMD2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21■□□□□ 0.95
SPNS3Q6ZMD2 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21■□□□□ 0.95
SPNS3Q6ZMD2 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SPNS3Q6ZMD2 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.99■□□□□ 0.95
SPNS3Q6ZMD2 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.99■□□□□ 0.95
SPNS3Q6ZMD2 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPNS3Q6ZMD2 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.99■□□□□ 0.95
SPNS3Q6ZMD2 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
SPNS3Q6ZMD2 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SPNS3Q6ZMD2 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPNS3Q6ZMD2 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPNS3Q6ZMD2 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPNS3Q6ZMD2 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.98■□□□□ 0.95
SPNS3Q6ZMD2 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPNS3Q6ZMD2 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.97■□□□□ 0.95
SPNS3Q6ZMD2 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPNS3Q6ZMD2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.97■□□□□ 0.95
SPNS3Q6ZMD2 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
SPNS3Q6ZMD2 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SPNS3Q6ZMD2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.96■□□□□ 0.95
SPNS3Q6ZMD2 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.96■□□□□ 0.95
SPNS3Q6ZMD2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SPNS3Q6ZMD2 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPNS3Q6ZMD2 AC019171.1-201ENST00000601251 1056 ntBASIC20.96■□□□□ 0.95
SPNS3Q6ZMD2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPNS3Q6ZMD2 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SPNS3Q6ZMD2 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.95■□□□□ 0.94
SPNS3Q6ZMD2 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SPNS3Q6ZMD2 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPNS3Q6ZMD2 AL359258.2-201ENST00000564063 1566 ntBASIC20.95■□□□□ 0.94
SPNS3Q6ZMD2 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SPNS3Q6ZMD2 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.95■□□□□ 0.94
SPNS3Q6ZMD2 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.95■□□□□ 0.94
SPNS3Q6ZMD2 AC092666.2-201ENST00000613287 246 ntBASIC20.95■□□□□ 0.94
SPNS3Q6ZMD2 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SPNS3Q6ZMD2 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPNS3Q6ZMD2 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.94■□□□□ 0.94
SPNS3Q6ZMD2 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.94■□□□□ 0.94
SPNS3Q6ZMD2 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.94■□□□□ 0.94
SPNS3Q6ZMD2 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SPNS3Q6ZMD2 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.94■□□□□ 0.94
SPNS3Q6ZMD2 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPNS3Q6ZMD2 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SPNS3Q6ZMD2 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPNS3Q6ZMD2 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.93■□□□□ 0.94
SPNS3Q6ZMD2 MIR3960-201ENST00000583311 91 ntBASIC20.93■□□□□ 0.94
SPNS3Q6ZMD2 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.93■□□□□ 0.94
SPNS3Q6ZMD2 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SPNS3Q6ZMD2 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.93■□□□□ 0.94
SPNS3Q6ZMD2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPNS3Q6ZMD2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.92■□□□□ 0.94
SPNS3Q6ZMD2 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.92■□□□□ 0.94
SPNS3Q6ZMD2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.92■□□□□ 0.94
SPNS3Q6ZMD2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SPNS3Q6ZMD2 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SPNS3Q6ZMD2 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.91■□□□□ 0.94
SPNS3Q6ZMD2 LONRF2P2-201ENST00000439212 571 ntBASIC20.91■□□□□ 0.94
SPNS3Q6ZMD2 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
SPNS3Q6ZMD2 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SPNS3Q6ZMD2 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPNS3Q6ZMD2 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SPNS3Q6ZMD2 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPNS3Q6ZMD2 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.9■□□□□ 0.94
SPNS3Q6ZMD2 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.9■□□□□ 0.94
SPNS3Q6ZMD2 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.9■□□□□ 0.94
SPNS3Q6ZMD2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SPNS3Q6ZMD2 KRT125P-201ENST00000546827 989 ntBASIC20.9■□□□□ 0.94
SPNS3Q6ZMD2 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SPNS3Q6ZMD2 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.89■□□□□ 0.94
SPNS3Q6ZMD2 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
SPNS3Q6ZMD2 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPNS3Q6ZMD2 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.89■□□□□ 0.93
SPNS3Q6ZMD2 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPNS3Q6ZMD2 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms