Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LRFN4Q6PJG9 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRFN4Q6PJG9 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.76■■□□□ 1.07
LRFN4Q6PJG9 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LRFN4Q6PJG9 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.76■■□□□ 1.07
LRFN4Q6PJG9 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.76■■□□□ 1.07
LRFN4Q6PJG9 AC091060.1-201ENST00000623524 1766 ntBASIC21.76■■□□□ 1.07
LRFN4Q6PJG9 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRFN4Q6PJG9 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRFN4Q6PJG9 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRFN4Q6PJG9 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRFN4Q6PJG9 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRFN4Q6PJG9 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LRFN4Q6PJG9 AC126177.7-201ENST00000547904 679 ntBASIC21.75■■□□□ 1.07
LRFN4Q6PJG9 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.75■■□□□ 1.07
LRFN4Q6PJG9 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LRFN4Q6PJG9 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
LRFN4Q6PJG9 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
LRFN4Q6PJG9 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
LRFN4Q6PJG9 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LRFN4Q6PJG9 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.74■■□□□ 1.07
LRFN4Q6PJG9 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
LRFN4Q6PJG9 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRFN4Q6PJG9 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.73■■□□□ 1.07
LRFN4Q6PJG9 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRFN4Q6PJG9 AL359504.2-201ENST00000605506 1601 ntBASIC21.73■■□□□ 1.07
LRFN4Q6PJG9 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRFN4Q6PJG9 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRFN4Q6PJG9 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRFN4Q6PJG9 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LRFN4Q6PJG9 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
LRFN4Q6PJG9 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRFN4Q6PJG9 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.71■■□□□ 1.07
LRFN4Q6PJG9 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRFN4Q6PJG9 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRFN4Q6PJG9 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LRFN4Q6PJG9 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
LRFN4Q6PJG9 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.69■■□□□ 1.06
LRFN4Q6PJG9 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRFN4Q6PJG9 AC060814.1-201ENST00000554326 538 ntBASIC21.69■■□□□ 1.06
LRFN4Q6PJG9 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LRFN4Q6PJG9 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LRFN4Q6PJG9 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRFN4Q6PJG9 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRFN4Q6PJG9 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRFN4Q6PJG9 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRFN4Q6PJG9 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
LRFN4Q6PJG9 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRFN4Q6PJG9 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRFN4Q6PJG9 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.68■■□□□ 1.06
LRFN4Q6PJG9 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRFN4Q6PJG9 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
LRFN4Q6PJG9 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRFN4Q6PJG9 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
LRFN4Q6PJG9 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.67■■□□□ 1.06
LRFN4Q6PJG9 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.67■■□□□ 1.06
LRFN4Q6PJG9 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LRFN4Q6PJG9 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.67■■□□□ 1.06
LRFN4Q6PJG9 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.67■■□□□ 1.06
LRFN4Q6PJG9 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRFN4Q6PJG9 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
LRFN4Q6PJG9 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LRFN4Q6PJG9 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LRFN4Q6PJG9 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRFN4Q6PJG9 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRFN4Q6PJG9 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.66■■□□□ 1.06
LRFN4Q6PJG9 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LRFN4Q6PJG9 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LRFN4Q6PJG9 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRFN4Q6PJG9 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRFN4Q6PJG9 AC145676.1-201ENST00000514988 2004 ntBASIC21.65■■□□□ 1.06
LRFN4Q6PJG9 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.65■■□□□ 1.06
LRFN4Q6PJG9 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.65■■□□□ 1.06
LRFN4Q6PJG9 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LRFN4Q6PJG9 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
LRFN4Q6PJG9 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
LRFN4Q6PJG9 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
LRFN4Q6PJG9 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LRFN4Q6PJG9 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.64■■□□□ 1.05
LRFN4Q6PJG9 AC022413.1-201ENST00000624602 984 ntBASIC21.64■■□□□ 1.05
LRFN4Q6PJG9 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LRFN4Q6PJG9 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LRFN4Q6PJG9 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LRFN4Q6PJG9 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.64■■□□□ 1.05
LRFN4Q6PJG9 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LRFN4Q6PJG9 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LRFN4Q6PJG9 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LRFN4Q6PJG9 AL157400.5-201ENST00000507624 621 ntBASIC21.63■■□□□ 1.05
LRFN4Q6PJG9 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LRFN4Q6PJG9 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.63■■□□□ 1.05
LRFN4Q6PJG9 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LRFN4Q6PJG9 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LRFN4Q6PJG9 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LRFN4Q6PJG9 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LRFN4Q6PJG9 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LRFN4Q6PJG9 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LRFN4Q6PJG9 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.62■■□□□ 1.05
LRFN4Q6PJG9 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.62■■□□□ 1.05
LRFN4Q6PJG9 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LRFN4Q6PJG9 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms