Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDPF1Q6NVV7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDPF1Q6NVV7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDPF1Q6NVV7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDPF1Q6NVV7 AL121603.2-201ENST00000557373 2117 ntBASIC18.41■□□□□ 0.54
CDPF1Q6NVV7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDPF1Q6NVV7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDPF1Q6NVV7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CDPF1Q6NVV7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CDPF1Q6NVV7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDPF1Q6NVV7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CDPF1Q6NVV7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC18.4■□□□□ 0.54
CDPF1Q6NVV7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CDPF1Q6NVV7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDPF1Q6NVV7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDPF1Q6NVV7 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDPF1Q6NVV7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDPF1Q6NVV7 AC092803.2-201ENST00000564287 1899 ntBASIC18.39■□□□□ 0.53
CDPF1Q6NVV7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CDPF1Q6NVV7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CDPF1Q6NVV7 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDPF1Q6NVV7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC18.38■□□□□ 0.53
CDPF1Q6NVV7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDPF1Q6NVV7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDPF1Q6NVV7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDPF1Q6NVV7 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDPF1Q6NVV7 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.37■□□□□ 0.53
CDPF1Q6NVV7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDPF1Q6NVV7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CDPF1Q6NVV7 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDPF1Q6NVV7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CDPF1Q6NVV7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDPF1Q6NVV7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CDPF1Q6NVV7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDPF1Q6NVV7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDPF1Q6NVV7 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDPF1Q6NVV7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDPF1Q6NVV7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CDPF1Q6NVV7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDPF1Q6NVV7 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CDPF1Q6NVV7 LINC00565-201ENST00000562710 2331 ntBASIC18.36■□□□□ 0.53
CDPF1Q6NVV7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDPF1Q6NVV7 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CDPF1Q6NVV7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDPF1Q6NVV7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CDPF1Q6NVV7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.35■□□□□ 0.53
CDPF1Q6NVV7 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDPF1Q6NVV7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.35■□□□□ 0.53
CDPF1Q6NVV7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
CDPF1Q6NVV7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDPF1Q6NVV7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CDPF1Q6NVV7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDPF1Q6NVV7 C1orf229-201ENST00000623686 2258 ntBASIC18.34■□□□□ 0.53
CDPF1Q6NVV7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDPF1Q6NVV7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDPF1Q6NVV7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDPF1Q6NVV7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDPF1Q6NVV7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CDPF1Q6NVV7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDPF1Q6NVV7 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDPF1Q6NVV7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDPF1Q6NVV7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDPF1Q6NVV7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDPF1Q6NVV7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDPF1Q6NVV7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDPF1Q6NVV7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDPF1Q6NVV7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.32■□□□□ 0.52
CDPF1Q6NVV7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDPF1Q6NVV7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC18.32■□□□□ 0.52
CDPF1Q6NVV7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDPF1Q6NVV7 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDPF1Q6NVV7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDPF1Q6NVV7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CDPF1Q6NVV7 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDPF1Q6NVV7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDPF1Q6NVV7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDPF1Q6NVV7 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDPF1Q6NVV7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDPF1Q6NVV7 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDPF1Q6NVV7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CDPF1Q6NVV7 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDPF1Q6NVV7 RPS2P35-201ENST00000443417 897 ntBASIC18.3■□□□□ 0.52
CDPF1Q6NVV7 AP006261.1-201ENST00000584783 668 ntBASIC18.3■□□□□ 0.52
CDPF1Q6NVV7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CDPF1Q6NVV7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDPF1Q6NVV7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDPF1Q6NVV7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDPF1Q6NVV7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC18.3■□□□□ 0.52
CDPF1Q6NVV7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDPF1Q6NVV7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDPF1Q6NVV7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CDPF1Q6NVV7 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDPF1Q6NVV7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.29■□□□□ 0.52
CDPF1Q6NVV7 AC142381.3-201ENST00000568208 1670 ntBASIC18.29■□□□□ 0.52
CDPF1Q6NVV7 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC18.29■□□□□ 0.52
CDPF1Q6NVV7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDPF1Q6NVV7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.29■□□□□ 0.52
CDPF1Q6NVV7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDPF1Q6NVV7 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CDPF1Q6NVV7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms