Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC31.25■■■□□ 2.59
USPL1Q5W0Q7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
USPL1Q5W0Q7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
USPL1Q5W0Q7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
USPL1Q5W0Q7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC31.25■■■□□ 2.59
USPL1Q5W0Q7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
USPL1Q5W0Q7 AC139426.1-201ENST00000568218 2529 ntBASIC31.24■■■□□ 2.59
USPL1Q5W0Q7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC31.24■■■□□ 2.59
USPL1Q5W0Q7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
USPL1Q5W0Q7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
USPL1Q5W0Q7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
USPL1Q5W0Q7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
USPL1Q5W0Q7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
USPL1Q5W0Q7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
USPL1Q5W0Q7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
USPL1Q5W0Q7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC31.23■■■□□ 2.59
USPL1Q5W0Q7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
USPL1Q5W0Q7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC31.22■■■□□ 2.59
USPL1Q5W0Q7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
USPL1Q5W0Q7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC31.22■■■□□ 2.59
USPL1Q5W0Q7 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
USPL1Q5W0Q7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC31.21■■■□□ 2.59
USPL1Q5W0Q7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
USPL1Q5W0Q7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
USPL1Q5W0Q7 AL356441.2-201ENST00000443009 864 ntBASIC31.21■■■□□ 2.59
USPL1Q5W0Q7 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC31.21■■■□□ 2.59
USPL1Q5W0Q7 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
USPL1Q5W0Q7 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
USPL1Q5W0Q7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC31.2■■■□□ 2.59
USPL1Q5W0Q7 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
USPL1Q5W0Q7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
USPL1Q5W0Q7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC31.19■■■□□ 2.58
USPL1Q5W0Q7 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
USPL1Q5W0Q7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
USPL1Q5W0Q7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
USPL1Q5W0Q7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC31.18■■■□□ 2.58
USPL1Q5W0Q7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC31.18■■■□□ 2.58
USPL1Q5W0Q7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
USPL1Q5W0Q7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
USPL1Q5W0Q7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
USPL1Q5W0Q7 WHAMMP3-201ENST00000611636 1609 ntBASIC31.16■■■□□ 2.58
USPL1Q5W0Q7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
USPL1Q5W0Q7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
USPL1Q5W0Q7 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
USPL1Q5W0Q7 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
USPL1Q5W0Q7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
USPL1Q5W0Q7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
USPL1Q5W0Q7 AC019171.1-201ENST00000601251 1056 ntBASIC31.15■■■□□ 2.58
USPL1Q5W0Q7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC31.15■■■□□ 2.58
USPL1Q5W0Q7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC31.15■■■□□ 2.58
USPL1Q5W0Q7 AC239859.2-201ENST00000444165 318 ntBASIC31.14■■■□□ 2.58
USPL1Q5W0Q7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC31.14■■■□□ 2.58
USPL1Q5W0Q7 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC31.14■■■□□ 2.58
USPL1Q5W0Q7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
USPL1Q5W0Q7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.58
USPL1Q5W0Q7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC31.14■■■□□ 2.58
USPL1Q5W0Q7 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
USPL1Q5W0Q7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
USPL1Q5W0Q7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
USPL1Q5W0Q7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC31.13■■■□□ 2.57
USPL1Q5W0Q7 AC087393.1-201ENST00000582896 145 ntBASIC31.13■■■□□ 2.57
USPL1Q5W0Q7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
USPL1Q5W0Q7 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC31.12■■■□□ 2.57
USPL1Q5W0Q7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC31.12■■■□□ 2.57
USPL1Q5W0Q7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
USPL1Q5W0Q7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
USPL1Q5W0Q7 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
USPL1Q5W0Q7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC31.1■■■□□ 2.57
USPL1Q5W0Q7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC31.1■■■□□ 2.57
USPL1Q5W0Q7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
USPL1Q5W0Q7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC31.09■■■□□ 2.57
USPL1Q5W0Q7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
USPL1Q5W0Q7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC31.09■■■□□ 2.57
USPL1Q5W0Q7 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC31.09■■■□□ 2.57
USPL1Q5W0Q7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
USPL1Q5W0Q7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC31.08■■■□□ 2.57
USPL1Q5W0Q7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC31.08■■■□□ 2.57
USPL1Q5W0Q7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC31.08■■■□□ 2.57
USPL1Q5W0Q7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.57
USPL1Q5W0Q7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
USPL1Q5W0Q7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
USPL1Q5W0Q7 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC31.07■■■□□ 2.56
USPL1Q5W0Q7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC31.07■■■□□ 2.56
USPL1Q5W0Q7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC31.07■■■□□ 2.56
USPL1Q5W0Q7 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
USPL1Q5W0Q7 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
USPL1Q5W0Q7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC31.06■■■□□ 2.56
USPL1Q5W0Q7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
USPL1Q5W0Q7 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC31.05■■■□□ 2.56
USPL1Q5W0Q7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
USPL1Q5W0Q7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
USPL1Q5W0Q7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC31.05■■■□□ 2.56
USPL1Q5W0Q7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC31.04■■■□□ 2.56
USPL1Q5W0Q7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.04■■■□□ 2.56
USPL1Q5W0Q7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC31.04■■■□□ 2.56
USPL1Q5W0Q7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
USPL1Q5W0Q7 LONRF2P2-201ENST00000439212 571 ntBASIC31.04■■■□□ 2.56
USPL1Q5W0Q7 RPS2P7-201ENST00000447334 885 ntBASIC31.04■■■□□ 2.56
USPL1Q5W0Q7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC31.04■■■□□ 2.56
USPL1Q5W0Q7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms