Protein–RNA interactions for Protein: Q4G0N8

SLC9C1, Sodium/hydrogen exchanger 10, humanhuman

Predictions only

Length 1,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9C1Q4G0N8 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SLC9C1Q4G0N8 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC28.34■■■□□ 2.13
SLC9C1Q4G0N8 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SLC9C1Q4G0N8 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC28.34■■■□□ 2.13
SLC9C1Q4G0N8 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
SLC9C1Q4G0N8 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
SLC9C1Q4G0N8 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
SLC9C1Q4G0N8 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC28.33■■■□□ 2.13
SLC9C1Q4G0N8 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SLC9C1Q4G0N8 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
SLC9C1Q4G0N8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC28.32■■■□□ 2.12
SLC9C1Q4G0N8 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC28.31■■■□□ 2.12
SLC9C1Q4G0N8 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SLC9C1Q4G0N8 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC28.31■■■□□ 2.12
SLC9C1Q4G0N8 Z92544.1-202ENST00000571933 1220 ntBASIC28.31■■■□□ 2.12
SLC9C1Q4G0N8 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC28.31■■■□□ 2.12
SLC9C1Q4G0N8 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SLC9C1Q4G0N8 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SLC9C1Q4G0N8 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SLC9C1Q4G0N8 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SLC9C1Q4G0N8 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC28.3■■■□□ 2.12
SLC9C1Q4G0N8 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC28.29■■■□□ 2.12
SLC9C1Q4G0N8 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
SLC9C1Q4G0N8 CREM-229ENST00000474362 1030 ntTSL 2 BASIC28.29■■■□□ 2.12
SLC9C1Q4G0N8 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC28.29■■■□□ 2.12
SLC9C1Q4G0N8 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SLC9C1Q4G0N8 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SLC9C1Q4G0N8 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC28.28■■■□□ 2.12
SLC9C1Q4G0N8 MIR638-201ENST00000385237 100 ntBASIC28.28■■■□□ 2.12
SLC9C1Q4G0N8 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SLC9C1Q4G0N8 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SLC9C1Q4G0N8 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
SLC9C1Q4G0N8 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC28.27■■■□□ 2.12
SLC9C1Q4G0N8 AL139393.2-201ENST00000608721 2025 ntBASIC28.26■■■□□ 2.12
SLC9C1Q4G0N8 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC28.26■■■□□ 2.11
SLC9C1Q4G0N8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC28.26■■■□□ 2.11
SLC9C1Q4G0N8 TK2-216ENST00000564917 1156 ntTSL 3 BASIC28.26■■■□□ 2.11
SLC9C1Q4G0N8 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC28.26■■■□□ 2.11
SLC9C1Q4G0N8 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SLC9C1Q4G0N8 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
SLC9C1Q4G0N8 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
SLC9C1Q4G0N8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SLC9C1Q4G0N8 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC28.25■■■□□ 2.11
SLC9C1Q4G0N8 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC28.25■■■□□ 2.11
SLC9C1Q4G0N8 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC28.25■■■□□ 2.11
SLC9C1Q4G0N8 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SLC9C1Q4G0N8 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
SLC9C1Q4G0N8 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SLC9C1Q4G0N8 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SLC9C1Q4G0N8 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
SLC9C1Q4G0N8 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC28.23■■■□□ 2.11
SLC9C1Q4G0N8 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
SLC9C1Q4G0N8 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC28.23■■■□□ 2.11
SLC9C1Q4G0N8 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SLC9C1Q4G0N8 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SLC9C1Q4G0N8 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
SLC9C1Q4G0N8 AC019171.1-201ENST00000601251 1056 ntBASIC28.2■■■□□ 2.1
SLC9C1Q4G0N8 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
SLC9C1Q4G0N8 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SLC9C1Q4G0N8 AC142086.6-201ENST00000621154 1765 ntBASIC28.19■■■□□ 2.1
SLC9C1Q4G0N8 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC28.19■■■□□ 2.1
SLC9C1Q4G0N8 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC28.19■■■□□ 2.1
SLC9C1Q4G0N8 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
SLC9C1Q4G0N8 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
SLC9C1Q4G0N8 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SLC9C1Q4G0N8 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
SLC9C1Q4G0N8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SLC9C1Q4G0N8 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
SLC9C1Q4G0N8 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC28.18■■■□□ 2.1
SLC9C1Q4G0N8 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SLC9C1Q4G0N8 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
SLC9C1Q4G0N8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
SLC9C1Q4G0N8 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SLC9C1Q4G0N8 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SLC9C1Q4G0N8 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
SLC9C1Q4G0N8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SLC9C1Q4G0N8 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SLC9C1Q4G0N8 KRT125P-201ENST00000546827 989 ntBASIC28.16■■■□□ 2.1
SLC9C1Q4G0N8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC28.16■■■□□ 2.1
SLC9C1Q4G0N8 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC28.16■■■□□ 2.1
SLC9C1Q4G0N8 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SLC9C1Q4G0N8 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC28.14■■■□□ 2.1
SLC9C1Q4G0N8 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
SLC9C1Q4G0N8 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC28.14■■■□□ 2.1
SLC9C1Q4G0N8 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC28.14■■■□□ 2.1
SLC9C1Q4G0N8 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
SLC9C1Q4G0N8 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
SLC9C1Q4G0N8 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
SLC9C1Q4G0N8 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
SLC9C1Q4G0N8 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC28.13■■■□□ 2.09
SLC9C1Q4G0N8 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC28.12■■■□□ 2.09
SLC9C1Q4G0N8 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC28.12■■■□□ 2.09
SLC9C1Q4G0N8 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
SLC9C1Q4G0N8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
SLC9C1Q4G0N8 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
SLC9C1Q4G0N8 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC28.12■■■□□ 2.09
SLC9C1Q4G0N8 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC28.12■■■□□ 2.09
SLC9C1Q4G0N8 RALB-208ENST00000631312 311 ntTSL 5 BASIC28.12■■■□□ 2.09
SLC9C1Q4G0N8 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC28.12■■■□□ 2.09
SLC9C1Q4G0N8 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms